RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PPFIBP1Q86W92 1011 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TMEM139Q8IV31 216 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 HERC6Q8IVU3 1022 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CD302Q8IX05 232 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 RPUSD2Q8IZ73 545 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 LRRC43Q8N309 656 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 Q8N3U1 123 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PDCL2Q8N4E4 241 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 UBR7Q8N806 425 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 RBBP8NLQ8NC74 664 aaPredicted RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 ATRIPQ8WXE1 791 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 HERVK_113Q902F9 699 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TOP1MTQ969P6 601 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ZNF689Q96CS4 500 aaPredicted RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 RNPC3Q96LT9 517 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 SPAG5Q96R06 1193 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CHP1Q99653 195 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 LBHD1Q9BQE6 289 aaPredicted RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 RTP3Q9BQQ7 232 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ZSWIM1Q9BR11 485 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 BCO2Q9BYV7 579 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 RHOBTB2Q9BYZ6 727 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 GPR62Q9BZJ7 368 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ELOVL4Q9GZR5 314 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ELAC1Q9H777 363 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 PLCB1Q9NQ66 1216 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CISHQ9NSE2 258 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 MTUS1Q9ULD2 1270 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PYCARDQ9ULZ3 195 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CAPN11Q9UMQ6 739 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TFR2Q9UP52 801 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 YBX2Q9Y2T7 364 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 PCDHB4Q9Y5E5 795 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PCDHGC5Q9Y5F6 944 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 PLXNA4Q9HCM2 1894 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 A0A1W2PQJ5 194 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CYB561D2O14569 222 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ATP2C2O75185 946 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 GJB5O95377 273 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 GALTP07902 379 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CAPN2P17655 700 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CYP3A5P20815 502 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CES1P23141 567 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 LMO2P25791 158 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 MZF1P28698 734 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 NOS3P29474 1203 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 SOX5P35711 763 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 AP3M2P53677 418 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 MFAP3P55082 362 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 LILRA4P59901 499 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ZBED6P86452 979 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CCZ1BP86790 482 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CCZ1P86791 482 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 POU5F1Q01860 360 aaKnown RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 ENPEPQ07075 957 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CETN1Q12798 172 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 TRIM14Q14142 442 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 BTG3Q14201 252 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 HSP90AA2PQ14568 343 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 ASIC2Q16515 512 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 RASIP1Q5U651 963 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 SFMBT2Q5VUG0 894 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 HGSNATQ68CP4 663 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 PRSS55Q6UWB4 352 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 RAD9BQ6WBX8 426 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 DSTYKQ6XUX3 929 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 TOGARAM2Q6ZUX3 1019 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 DPH6Q7L8W6 267 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ZNF571Q7Z3V5 609 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 NOP9Q86U38 636 aaKnown RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 CEP57Q86XR8 500 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 PALB2Q86YC2 1186 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 PASD1Q8IV76 773 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ADGRF2Q8IZF7 708 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 LRRC52Q8N7C0 313 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 COLGALT1Q8NBJ5 622 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 STKLD1Q8NE28 680 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 OR6B3Q8NGW1 331 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 LNX1Q8TBB1 728 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 AUTS2Q8WXX7 1259 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 TFAP2BQ92481 460 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 SHC3Q92529 594 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ANP32BQ92688 251 aaKnown RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 PMEPA1Q969W9 287 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 SENP8Q96LD8 212 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ZNF560Q96MR9 790 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 FAM193BQ96PV7 902 aaPredicted RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 DNAJC7Q99615 494 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 C17orf80Q9BSJ5 609 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 DESI2Q9BSY9 194 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 STK33Q9BYT3 514 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 IMPG2Q9BZV3 1241 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 RASSF4Q9H2L5 321 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 CERS4Q9HA82 394 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 UBN1Q9NPG3 1134 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 FAM49BQ9NUQ9 324 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 SPTLC3Q9NUV7 552 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 SLC38A7Q9NVC3 462 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ARHGAP20Q9P2F6 1191 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms