RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 BAP1Q92560 729 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 MRPS31Q92665 395 aaKnown RBP10.63□□□□□ -0.71
USP3-216ENST00000559873 SYN2Q92777 582 aaPredicted RBP10.63□□□□□ -0.71
USP3-216ENST00000559873 GOLGA1Q92805 767 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 FBXO32Q969P5 355 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 ACSF2Q96CM8 615 aaPredicted RBP10.63□□□□□ -0.71
USP3-216ENST00000559873 HSFY1Q96LI6 401 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 TTLL2Q9BWV7 592 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 PHF7Q9BWX1 381 aaPredicted RBP10.63□□□□□ -0.71
USP3-216ENST00000559873 LHX5Q9H2C1 402 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 ATXN3LQ9H3M9 355 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 SYNCQ9H7C4 482 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 CYLDQ9NQC7 956 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP3-216ENST00000559873 TRPM5Q9NZQ8 1165 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 PRKAG3Q9UGI9 489 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
USP3-216ENST00000559873 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
USP3-216ENST00000559873 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 MFAP3LO75121 409 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 FBXO21O94952 628 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 HMGA1P17096 107 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 CDC25BP30305 580 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 GBP2P32456 591 aaPredicted RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 PRKCIP41743 596 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 GPD2P43304 727 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 PSEN1P49768 467 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 TKTL1P51854 596 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 KIF11P52732 1056 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 TFF2Q03403 129 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 PDCLQ13371 301 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 TDRD12Q587J7 1177 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 PRSS36Q5K4E3 855 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 TAF3Q5VWG9 929 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 NOP9Q86U38 636 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 PASD1Q8IV76 773 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 DRC7Q8IY82 874 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 UBA3Q8TBC4 463 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 CPLX3Q8WVH0 158 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 ANP32BQ92688 251 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 CDK5RAP1Q96SZ6 601 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 ZSWIM1Q9BR11 485 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 TRIM62Q9BVG3 475 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 POMKQ9H5K3 350 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 SLITRK6Q9H5Y7 841 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 ACP6Q9NPH0 428 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 CNGB3Q9NQW8 809 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 TLR8Q9NR97 1041 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 SEPT11Q9NVA2 429 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 HCFC1R1Q9NWW0 138 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 AIPL1Q9NZN9 384 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 NOCTQ9UK39 431 aaKnown RBP10.62□□□□□ -0.71
USP3-216ENST00000559873 PATJQ8NI35 1801 aa10.62□□□□□ -0.71
USP3-216ENST00000559873 MYH10P35580 1976 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 A0A1W2PRU2 124 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 FAM92AA1XBS5 289 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 AKR1B15C9JRZ8 316 aaPredicted RBP10.61□□□□□ -0.71
USP3-216ENST00000559873 TNFRSF10BO14763 440 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 BEST1O76090 585 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 PFKLP17858 780 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 CDH5P33151 784 aaPredicted RBP10.61□□□□□ -0.71
USP3-216ENST00000559873 NSFP46459 744 aaKnown RBP10.61□□□□□ -0.71
USP3-216ENST00000559873 NTHL1P78549 312 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 ADIGQ0VDE8 80 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 TAF10Q12962 218 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 MTMR3Q13615 1198 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 RAB41Q5JT25 222 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 DENND1BQ6P3S1 775 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP3-216ENST00000559873 SCML4Q8N228 414 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 C1orf131Q8NDD1 294 aaKnown RBP10.61□□□□□ -0.71
USP3-216ENST00000559873 OR8K1Q8NGG5 319 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 SLC35F5Q8WV83 523 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 AGPAT1Q99943 283 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 NACA2Q9H009 215 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 ZNF334Q9HCZ1 680 aaPredicted RBP10.61□□□□□ -0.71
USP3-216ENST00000559873 TMEM30AQ9NV96 361 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 GDE1Q9NZC3 331 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 CDH7Q9ULB5 785 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 SCML2Q9UQR0 700 aa10.61□□□□□ -0.71
USP3-216ENST00000559873 DENND4AQ7Z401 1863 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 C2orf16Q68DN1 1984 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 TRAV19A0A0A6YYK7 116 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 HHLA1C9JL84 531 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 ADCY5O95622 1261 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 ZBED1O96006 694 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 CALCAP01258 141 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 SERPING1P05155 500 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 MMEP08473 750 aa10.6□□□□□ -0.71
USP3-216ENST00000559873 RALAP11233 206 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms