RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 EXD1Q8NHP7 514 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 USP6NLQ92738 828 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 SGF29Q96ES7 293 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 SERAC1Q96JX3 654 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 SRPK1Q96SB4 655 aaKnown RBP6.92□□□□□ -1.3
ZEB1-217ENST00000559858 KCNK16Q96T55 309 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 EYA3Q99504 573 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 PAIP1Q9H074 479 aaKnown RBP6.92□□□□□ -1.3
ZEB1-217ENST00000559858 TUT1Q9H6E5 874 aaKnown RBP6.92□□□□□ -1.3
ZEB1-217ENST00000559858 BCAS3Q9H6U6 928 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 NRDE2Q9H7Z3 1164 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 DNPEPQ9ULA0 475 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 COL18A1P39060 1754 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 PROSCO94903 275 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 ESRRBO95718 433 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 KITP10721 976 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 ETS1P14921 441 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 CYP11B1P15538 503 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 MFAP3P55082 362 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 C21orf59P57076 290 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 PTK7Q13308 1070 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 ADGRE1Q14246 886 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 MYBPC2Q14324 1141 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 GK3PQ14409 553 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 PSMD6Q15008 389 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 OASLQ15646 514 aaKnown RBP6.92□□□□□ -1.3
ZEB1-217ENST00000559858 ASPRV1Q53RT3 343 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 ZFP1Q6P2D0 407 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 TICAM1Q8IUC6 712 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 NUDCD3Q8IVD9 361 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 DEFB107AQ8IZN7 70 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 KAT5Q92993 513 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 ZMAT2Q96NC0 199 aaKnown RBP6.92□□□□□ -1.3
ZEB1-217ENST00000559858 PSTPIP2Q9H939 334 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 GPCPD1Q9NPB8 672 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 VPS45Q9NRW7 570 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 HERC5Q9UII4 1024 aaKnown RBP6.92□□□□□ -1.3
ZEB1-217ENST00000559858 RABGAP1Q9Y3P9 1069 aa6.92□□□□□ -1.3
ZEB1-217ENST00000559858 NUP98P52948 1817 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 NHSL1Q5SYE7 1610 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 XPOTO43592 962 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 FAM189A1O60320 539 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 CNOT3O75175 753 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 BANF1O75531 89 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SORBS2O94875 1100 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 FUCA1P04066 466 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 INHBAP08476 426 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TFPTP0C1Z6 253 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 PSMC3P17980 439 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 PRDX5P30044 214 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 EIF2B2P49770 351 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 VAMP7P51809 220 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SPIRE1Q08AE8 756 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 FAAP100Q0VG06 881 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 CHI3L2Q15782 390 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 ANKDD1AQ495B1 522 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TCHHL1Q5QJ38 904 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 C6orf52Q5T4I8 152 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 ITPRIPL1Q6GPH6 555 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 RINT1Q6NUQ1 792 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 DENND5BQ6ZUT9 1274 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 HPS6Q86YV9 775 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 CENPSQ8N2Z9 138 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 KCTD17Q8N5Z5 321 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 JDP2Q8WYK2 163 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SHC3Q92529 594 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 ATP6V0A1Q93050 837 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 EME1Q96AY2 570 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TMIGD2Q96BF3 282 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 CMTM5Q96DZ9 223 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TRIM11Q96F44 468 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 PLEKHA8Q96JA3 519 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 RANBP9Q96S59 729 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TRIM56Q9BRZ2 755 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SLC2A11Q9BYW1 496 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 NYXQ9GZU5 481 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TMEM117Q9H0C3 514 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 STN1Q9H668 368 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 CYP4F11Q9HBI6 524 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 PCDH9Q9HC56 1237 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SLC38A7Q9NVC3 462 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SIRPGQ9P1W8 387 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SEL1LQ9UBV2 794 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 MARCOQ9UEW3 520 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 APOBEC2Q9Y235 224 aaKnown RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 GIT1Q9Y2X7 761 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 PLLPQ9Y342 182 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SNCAIPQ9Y6H5 919 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 MAST2Q6P0Q8 1798 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 FRMPD2Q68DX3 1309 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 TOGARAM1Q9Y4F4 1720 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 WTIPA6NIX2 430 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 GOLGA8SH3BPF8 625 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 GOLGA8MH3BSY2 632 aa6.91□□□□□ -1.3
ZEB1-217ENST00000559858 ZNF701M0R085 212 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-217ENST00000559858 SPTLC1O15269 473 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms