RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.45■□□□□ 0.38
TPM1-219ENST00000559397 PCDHB5Q9Y5E4 795 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 SPTBN5Q9NRC6 3674 aaKnown RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 MICAL2O94851 1124 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 LSM8O95777 96 aaKnown RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 MYBL1P10243 752 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 ATF2P15336 505 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 CDH5P33151 784 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 CLCN4P51793 760 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 ADGRE1Q14246 886 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 PKDCCQ504Y2 493 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 NAA35Q5VZE5 725 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 RSRC2Q7L4I2 434 aaKnown RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 FAM35AQ86V20 835 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 PHF13Q86YI8 300 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 SPATA2LQ8IUW3 424 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 SPPL2BQ8TCT7 592 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 ZNF653Q96CK0 615 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 TRIM11Q96F44 468 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 VCPIP1Q96JH7 1222 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 RHOBTB2Q9BYZ6 727 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 ABI2Q9NYB9 513 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 PER2O15055 1255 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 MED7O43513 233 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 C1RP00736 705 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 POU3F3P20264 500 aaPredicted RBP17.44■□□□□ 0.38
TPM1-219ENST00000559397 BDNFP23560 247 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 CYP2F1P24903 491 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 ADORA2BP29275 332 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 CACNA2D1P54289 1103 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 ADCY1Q08828 1119 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 DUSP4Q13115 394 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 NAA30Q147X3 362 aaPredicted RBP17.44■□□□□ 0.38
TPM1-219ENST00000559397 GOLGA7BQ2TAP0 167 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 MON1BQ7L1V2 547 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 NT5DC3Q86UY8 548 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 TTC30AQ86WT1 665 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 CREG2Q8IUH2 290 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 ANKRD52Q8NB46 1076 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 CPA5Q8WXQ8 436 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 MED10Q9BTT4 135 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 TMEM30AQ9NV96 361 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 CTTNBP2NLQ9P2B4 639 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 UVRAGQ9P2Y5 699 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 REV3LO60673 3130 aa17.44■□□□□ 0.38
TPM1-219ENST00000559397 MTCL1Q9Y4B5 1905 aaKnown RBP17.43■□□□□ 0.38
TPM1-219ENST00000559397 SEC24AO95486 1093 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
TPM1-219ENST00000559397 PTP4A2Q12974 167 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 DUSP6Q16828 381 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 C11orf63Q6NUN7 778 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
TPM1-219ENST00000559397 TTC9BQ8N6N2 239 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 COG1Q8WTW3 980 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 FAM161BQ96MY7 647 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 DUSP16Q9BY84 665 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 GOLPH3Q9H4A6 298 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 NSUN3Q9H649 340 aaKnown RBP17.43■□□□□ 0.38
TPM1-219ENST00000559397 HSFX1Q9UBD0 423 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 CNOT8Q9UFF9 292 aaKnown RBP17.43■□□□□ 0.38
TPM1-219ENST00000559397 FBXW11Q9UKB1 542 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 MAFFQ9ULX9 164 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 SLC27A5Q9Y2P5 690 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 MTCH2Q9Y6C9 303 aa17.43■□□□□ 0.38
TPM1-219ENST00000559397 FAM170AA1A519 330 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 CES2O00748 559 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 ZNF185O15231 689 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 BEST1O76090 585 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 GLUD1P00367 558 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 CKAP4Q07065 602 aaKnown RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 RPS6KA1Q15418 735 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 DENND1BQ6P3S1 775 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 VSTM1Q6UX27 236 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 DAAM2Q86T65 1068 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 RBM23Q86U06 439 aaKnown RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 PASD1Q8IV76 773 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 UBA3Q8TBC4 463 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 SMARCD1Q96GM5 515 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 SMOQ99835 787 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 LHX5Q9H2C1 402 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 TLE6Q9H808 572 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 CSNK1G1Q9HCP0 422 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 KRT82Q9NSB4 513 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 M0QYV0 167 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 PDE2AO00408 941 aaPredicted RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 ATMINO43313 823 aaPredicted RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 AP1G2O75843 785 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 SPATA31D3P0C874 917 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 FAM200BP0CF97 657 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 HAPLN1P10915 354 aaPredicted RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 NPR3P17342 541 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 MMP8P22894 467 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 GPD2P43304 727 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 MAGEA11P43364 429 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 TUBB4BP68371 445 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms