RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ADCK1Q86TW2 530 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 MYLK4Q86YV6 388 aaPredicted RBP7.39□□□□□ -1.23
USP3-210ENST00000559192 CATSPER1Q8NEC5 780 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 ACTL9Q8TC94 416 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 OPTNQ96CV9 577 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 ZNF317Q96PQ6 595 aaPredicted RBP7.39□□□□□ -1.23
USP3-210ENST00000559192 GORASP1Q9BQQ3 440 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 WDR18Q9BV38 432 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 TARS2Q9BW92 718 aaKnown RBP7.39□□□□□ -1.23
USP3-210ENST00000559192 CAAP1Q9H8G2 361 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 LRRC4CQ9HCJ2 640 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 SPATA31A1Q5TZJ5 1347 aa7.39□□□□□ -1.23
USP3-210ENST00000559192 F8VP50 259 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 H0YC42 278 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 AKAP10O43572 662 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 LIASO43766 372 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 EDF1O60869 148 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 TMCC1O94876 653 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ALADP13716 330 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ANPEPP15144 967 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TAS2R40P59535 323 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SLC25A3Q00325 362 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TBL3Q12788 808 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 FASTKD3Q14CZ7 662 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 FASTKD1Q53R41 847 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 SLC10A5Q5PT55 438 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TMTC4Q5T4D3 741 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MFSD5Q6N075 450 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 CDR2LQ86X02 465 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 UCMAQ8WVF2 138 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 PPP2R3CQ969Q6 453 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MTMR12Q9C0I1 747 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 PCDH9Q9HC56 1237 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 FAM49BQ9NUQ9 324 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MID2Q9UJV3 735 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 GRID1Q9ULK0 1009 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 GSTA4O15217 222 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 DGAT1O75907 488 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TSPAN9O75954 239 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 CLPTM1O96005 669 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SRGAP2BP0DMP2 458 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ROR2Q01974 943 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 SLC35G1Q2M3R5 365 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 CWF19L1Q69YN2 538 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 POTEAQ6S8J7 498 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 LAYNQ6UX15 382 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 VSTM1Q6UX27 236 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 KDELC2Q7Z4H8 507 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SLFN11Q7Z7L1 901 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TRABD2AQ86V40 505 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MASTLQ96GX5 879 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 CLPTM1LQ96KA5 538 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MTFR1LQ9H019 292 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 KLHL25Q9H0H3 589 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 DENND2DQ9H6A0 471 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 ARHGEF3Q9NR81 526 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MAFGO15525 162 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SPAG6O75602 509 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ASNSP08243 561 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SP100P23497 879 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 AVPR1AP37288 418 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SERPINB9P50453 376 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SNRPFP62306 86 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 ZNF268Q14587 947 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 PARP6Q2NL67 630 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TRIM16LQ309B1 348 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 PODNQ7Z5L7 613 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SLC26A11Q86WA9 606 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 LRRN4Q8WUT4 740 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 CYGBQ8WWM9 190 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 L3MBTL3Q96JM7 780 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 SLITRK1Q96PX8 696 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TRAPPC9Q96Q05 1148 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 GCNAQ96QF7 691 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 MECRQ9BV79 373 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TRIM15Q9C019 465 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 TASP1Q9H6P5 420 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 RSAD1Q9HA92 442 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SLC5A4Q9NY91 659 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 SHOC2Q9UQ13 582 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ZMPSTE24O75844 475 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 FAM200BP0CF97 657 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 HSPA8P11142 646 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 RAB14P61106 215 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 PLOD1Q02809 727 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 OASLQ15646 514 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 HYIQ5T013 277 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 RWDD4Q6NW29 188 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 FAM71AQ8IYT1 594 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ABRAQ8N0Z2 381 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 RNF149Q8NC42 400 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 NSUN6Q8TEA1 469 aaKnown RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 TUBGCP3Q96CW5 907 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 RPAP3Q9H6T3 665 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 EBF2Q9HAK2 575 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 PACSIN3Q9UKS6 424 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ATF5Q9Y2D1 282 aaPredicted RBP7.38□□□□□ -1.23
USP3-210ENST00000559192 CRYBG1Q9Y4K1 1723 aa7.38□□□□□ -1.23
USP3-210ENST00000559192 ROBO3Q96MS0 1386 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms