RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TMEM74BQ9NUR3 256 aa12.84□□□□□ -0.35
CASC4-208ENST00000559151 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 ZFP36P26651 326 aaKnown RBP12.83□□□□□ -0.36
CASC4-208ENST00000559151 PRKAR1BP31321 381 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 UQCRC1P31930 480 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 PNLIPRP1P54315 467 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 BCAT1P54687 386 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 ALDH18A1P54886 795 aaKnown RBP12.83□□□□□ -0.36
CASC4-208ENST00000559151 TRIM71Q2Q1W2 868 aaKnown RBP12.83□□□□□ -0.36
CASC4-208ENST00000559151 SP5Q6BEB4 398 aaPredicted RBP12.83□□□□□ -0.36
CASC4-208ENST00000559151 LVRNQ6Q4G3 990 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 CYP26C1Q6V0L0 522 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 ATG4AQ8WYN0 398 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 RUBCNQ92622 972 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 UBXN10Q96LJ8 280 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 HIST1H2AAQ96QV6 131 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 ADAM2Q99965 735 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
CASC4-208ENST00000559151 CDKL5O76039 1030 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 NTSR2O95665 410 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 VIPP01282 170 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 MOGAT3Q86VF5 341 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 COLGALT2Q8IYK4 626 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 ABRAQ8N0Z2 381 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 TPSD1Q9BZJ3 242 aa12.82□□□□□ -0.36
CASC4-208ENST00000559151 TP63Q9H3D4 680 aaPredicted RBP12.82□□□□□ -0.36
CASC4-208ENST00000559151 EIF3FO00303 357 aaPredicted RBP12.81□□□□□ -0.36
CASC4-208ENST00000559151 PPM1DO15297 605 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 ACTL6BO94805 426 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 AGR2O95994 175 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 PPP3CBP16298 524 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 CD53P19397 219 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 HOXA5P20719 270 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 KLRK1P26718 216 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 FHL3Q13643 280 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 RALBP1Q15311 655 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 MMS22LQ6ZRQ5 1243 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 ZDHHC12Q96GR4 267 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
CASC4-208ENST00000559151 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
CASC4-208ENST00000559151 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
CASC4-208ENST00000559151 BTBD11A6QL63 1104 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 J3KTA2 159 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 ANXA6P08133 673 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 PDHA1P08559 390 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 NR4A1P22736 598 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 YY1P25490 414 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 DDX6P26196 483 aaKnown RBP eCLIP12.8□□□□□ -0.36
CASC4-208ENST00000559151 LY6KQ17RY6 165 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 CCDC117Q8IWD4 279 aaPredicted RBP12.8□□□□□ -0.36
CASC4-208ENST00000559151 SCAMP5Q8TAC9 235 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 OSCP1Q8WVF1 389 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 ATRIPQ8WXE1 791 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 RILPL2Q969X0 211 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
CASC4-208ENST00000559151 AURKAIP1Q9NWT8 199 aaPredicted RBP12.8□□□□□ -0.36
CASC4-208ENST00000559151 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
CASC4-208ENST00000559151 HMX3A6NHT5 357 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 UNC119BA6NIH7 251 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 NCAM2O15394 837 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 ERBB2P04626 1255 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
CASC4-208ENST00000559151 POLE2P56282 527 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 CHST13Q8NET6 341 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 MBD3L2Q8NHZ7 208 aaPredicted RBP12.79□□□□□ -0.36
CASC4-208ENST00000559151 SLC30A5Q8TAD4 765 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 C17orf80Q9BSJ5 609 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 PRDM8Q9NQV8 689 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 CEP72Q9P209 647 aa12.79□□□□□ -0.36
CASC4-208ENST00000559151 LOC100996750A0A140TA64 210 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
CASC4-208ENST00000559151 GATMP50440 423 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 AP2B1P63010 937 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 TIAL1Q01085 375 aaKnown RBP eCLIP12.78□□□□□ -0.36
CASC4-208ENST00000559151 GRM4Q14833 912 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
CASC4-208ENST00000559151 SLC44A2Q8IWA5 706 aaPredicted RBP12.78□□□□□ -0.36
CASC4-208ENST00000559151 IL17DQ8TAD2 202 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 ABHD5Q8WTS1 349 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 KRTAP4-6Q9BYQ5 205 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 KLC2Q9H0B6 622 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 FSCN3Q9NQT6 498 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 FER1L4A9Z1Z3 1794 aa12.78□□□□□ -0.36
CASC4-208ENST00000559151 MUSKO15146 869 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 PYGLP06737 847 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 EPHA3P29320 983 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 AKT1P31749 480 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 SLC25A3Q00325 362 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 SLC9A4Q6AI14 798 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 ARMC6Q6NXE6 501 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
CASC4-208ENST00000559151 IZUMO1Q8IYV9 350 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 ZNF276Q8N554 614 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
CASC4-208ENST00000559151 KIF17Q9P2E2 1029 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 PGAP2Q9UHJ9 254 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 ANAPC4Q9UJX5 808 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms