RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CXCL8P10145 99 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 SPINK2P20155 84 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 HOXC13P31276 330 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 CXCL12P48061 93 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 FNTBP49356 437 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 DGKGP49619 791 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
SPG11-212ENST00000558790 FCHO2Q0JRZ9 810 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 SIM2Q14190 667 aaPredicted RBP10.5□□□□□ -0.73
SPG11-212ENST00000558790 CCDC6Q16204 474 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 SLC10A6Q3KNW5 377 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 TXNDC11Q6PKC3 985 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 NXPE4Q6UWF7 544 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 PRR23CQ6ZRP0 262 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 KCNK18Q7Z418 384 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.5□□□□□ -0.73
SPG11-212ENST00000558790 MFSD6LQ8IWD5 586 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 SPEM1Q8N4L4 309 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 C4orf32Q8N8J7 132 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 IGSF22Q8N9C0 903 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 LEMD2Q8NC56 503 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 APPL2Q8NEU8 664 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 BEST2Q8NFU1 509 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 C8orf76Q96K31 380 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 ZBTB45Q96K62 511 aaPredicted RBP10.5□□□□□ -0.73
SPG11-212ENST00000558790 DRC1Q96MC2 740 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 TCF12Q99081 682 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 TCHPQ9BT92 498 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 LRRC3Q9BY71 257 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
SPG11-212ENST00000558790 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 SEMA4GQ9NTN9 838 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 LRWD1Q9UFC0 647 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 THADAQ6YHU6 1953 aa10.5□□□□□ -0.73
SPG11-212ENST00000558790 M0QZQ0 153 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 PAPSS2O95340 614 aaPredicted RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 TOP3BO95985 862 aaKnown RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 NEK4P51957 841 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 YWHAHQ04917 246 aaPredicted RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 SPAG1Q07617 926 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 LRRC32Q14392 662 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 SOWAHCQ53LP3 525 aaPredicted RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 CCDC83Q8IWF9 413 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 TMEM102Q8N9M5 508 aaPredicted RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 CSGALNACT1Q8TDX6 532 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 MSANTD3Q96H12 275 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 ZFYVE19Q96K21 471 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 HAPLN2Q9GZV7 340 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 MAFFQ9ULX9 164 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 TIMM13Q9Y5L4 95 aaPredicted RBP10.49□□□□□ -0.73
SPG11-212ENST00000558790 PI4KAP42356 2102 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 ABCA7Q8IZY2 2146 aa10.49□□□□□ -0.73
SPG11-212ENST00000558790 HECTD1Q9ULT8 2610 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 SPECC1L-ADORA2AF8WAN1 911 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 CHADO15335 359 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 TOM1L1O75674 476 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 SOAT2O75908 522 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 OAZ2O95190 189 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 PRAMEF12O95522 483 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 CDC25AP30304 524 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 GRIA4P48058 902 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 TRAPPC10P48553 1259 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 AARSP49588 968 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPG11-212ENST00000558790 GUCY2FP51841 1108 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
SPG11-212ENST00000558790 MLLT6P55198 1093 aaPredicted RBP10.48□□□□□ -0.73
SPG11-212ENST00000558790 RAD51AP2Q09MP3 1159 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 STRN3Q13033 797 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 DUSP4Q13115 394 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 PLD1Q13393 1074 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 CSRP2Q16527 193 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 SPRED3Q2MJR0 410 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 RINT1Q6NUQ1 792 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 C1orf228Q6PIY5 440 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 C1orf186Q6ZWK4 172 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 GAREM2Q75VX8 874 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 CCNJLQ8IV13 435 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 YAF2Q8IY57 180 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 TMEM161BQ8NDZ6 487 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 GLIS3Q8NEA6 775 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 TTC8Q8TAM2 541 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 GTSE1Q9NYZ3 720 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 PCDHB6Q9Y5E3 794 aa10.48□□□□□ -0.73
SPG11-212ENST00000558790 TNRC6BQ9UPQ9 1833 aaKnown RBP10.48□□□□□ -0.73
SPG11-212ENST00000558790 CEP192Q8TEP8 1941 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 MYOFQ9NZM1 2061 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 TTC26A0AVF1 554 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 MTMR11A4FU01 709 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 PPEF2O14830 753 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 TM4SF5O14894 197 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 GUCY2CP25092 1073 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 MARCKSP29966 332 aaPredicted RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 CDC25BP30305 580 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms