RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 NUP133Q8WUM0 1156 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 FUBP1Q96AE4 644 aaKnown RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 NACC2Q96BF6 587 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 HOOK2Q96ED9 719 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 MARS2Q96GW9 593 aaKnown RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 VRK1Q99986 396 aaPredicted RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 PAGR1Q9BTK6 254 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TTPALQ9BTX7 342 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TLR10Q9BXR5 811 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 LRRCC1Q9C099 1032 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 VIPAS39Q9H9C1 493 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TCF7L1Q9HCS4 588 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 ANO10Q9NW15 660 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 SYBUQ9NX95 663 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 VSX1Q9NZR4 365 aaPredicted RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 KCNE5Q9UJ90 142 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 DMRT1Q9Y5R6 373 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 USP16Q9Y5T5 823 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 COL22A1Q8NFW1 1626 aaPredicted RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 KAT6AQ92794 2004 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 RFX7Q2KHR2 1363 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 MED23Q9ULK4 1368 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 PARP4Q9UKK3 1724 aaKnown RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 OVOS2A0A0G2JMS6 1433 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 OVOS2A0A0J9YW53 1432 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 OVOS2Q6IE36 1432 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 PIPSLA2A3N6 862 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 VWA3AA6NCI4 1184 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TMEM191CA6NGB0 347 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 IKBKBO14920 756 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 POLR3GO15318 223 aaPredicted RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 B3GALT2O43825 422 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 RAMP2O60895 175 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 SLC43A1O75387 559 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ALDH1L1O75891 902 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 SEC31AO94979 1220 aaKnown RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 SMC2O95347 1197 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 HLA-DOAP06340 250 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 EGR2P11161 476 aaPredicted RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 MALP21145 153 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 SFPQP23246 707 aaKnown RBP eCLIP3.6□□□□□ -1.83
HERC1-203ENST00000558532 USP8P40818 1118 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 IGBP1P78318 339 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 MCL1Q07820 350 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 SNAPC2Q13487 334 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TUBB2AQ13885 445 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 NECTIN1Q15223 517 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TTF1Q15361 905 aaPredicted RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 ZRSR1Q15695 479 aaKnown RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 CYP2A13Q16696 494 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ME3Q16798 604 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 KRT24Q2M2I5 525 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 KHDC1Q4VXA5 237 aaKnown RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 HSP90AB3PQ58FF7 597 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 GORABQ5T7V8 394 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 LRRC31Q6UY01 552 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 GADL1Q6ZQY3 521 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 USP45Q70EL2 814 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ZNF365Q70YC5 407 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 GPR149Q86SP6 731 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TTC7BQ86TV6 843 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ERC1Q8IUD2 1116 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 UNC5CLQ8IV45 518 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.6□□□□□ -1.83
HERC1-203ENST00000558532 CEP57L1Q8IYX8 460 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TMIEQ8NEW7 156 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ANKRD20A12PQ8NF67 263 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 NLGN4YQ8NFZ3 816 aaPredicted RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 SSH3Q8TE77 659 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 HSPBAP1Q96EW2 488 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 KLHL32Q96NJ5 620 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TUBB2BQ9BVA1 445 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ALOXE3Q9BYJ1 711 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 REXO4Q9GZR2 422 aaKnown RBP3.6□□□□□ -1.83
HERC1-203ENST00000558532 TMEM74BQ9NUR3 256 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 TERF2IPQ9NYB0 399 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 JKAMPQ9P055 326 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 RCOR1Q9UKL0 485 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 SLC45A2Q9UMX9 530 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 L1RE1Q9UN81 338 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 CHD1O14646 1710 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 PEAK1Q9H792 1746 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 LAMA4Q16363 1823 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 MYO5BQ9ULV0 1848 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 POGZQ7Z3K3 1410 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 ANKARQ7Z5J8 1434 aa3.6□□□□□ -1.83
HERC1-203ENST00000558532 KDM3BQ7LBC6 1761 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 TMCO5BA8MYB1 307 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 F2RL2O00254 374 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 ZSCAN12O43309 604 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 EIF3JO75822 258 aaKnown RBP3.59□□□□□ -1.83
HERC1-203ENST00000558532 AGFG2O95081 481 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 IL33O95760 270 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 GPANK1O95872 356 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 GNAI2P04899 355 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 POU2F2P09086 479 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 MTHFD1P11586 935 aaKnown RBP3.59□□□□□ -1.83
HERC1-203ENST00000558532 TGM1P22735 817 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 MAP2K2P36507 400 aa3.59□□□□□ -1.83
HERC1-203ENST00000558532 LMAN1P49257 510 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms