RNA–Protein interactions for RNA: ENST00000558380.1

PIF1-203, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-203ENST00000558380 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.24
PIF1-203ENST00000558380 FANCMQ8IYD8 2048 aa16.58■□□□□ 0.24
PIF1-203ENST00000558380 WDR87Q6ZQQ6 2873 aa16.58■□□□□ 0.24
PIF1-203ENST00000558380 CETN3O15182 167 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
PIF1-203ENST00000558380 ZXDBP98169 803 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 LRRC63Q05C16 580 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 TAF10Q12962 218 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 PPP2R5DQ14738 602 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 PON2Q15165 354 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 EML3Q32P44 896 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 KRT39Q6A163 491 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 ACOT1Q86TX2 421 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 SPEM1Q8N4L4 309 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 TTC8Q8TAM2 541 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 SH3RF2Q8TEC5 729 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 KCNK16Q96T55 309 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 EBF3Q9H4W6 596 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
PIF1-203ENST00000558380 ZNF292O60281 2723 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 F5P12259 2224 aa16.57■□□□□ 0.24
PIF1-203ENST00000558380 TRDMT1O14717 391 aaKnown RBP16.56■□□□□ 0.24
PIF1-203ENST00000558380 STX10O60499 249 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
PIF1-203ENST00000558380 CLSTN1O94985 981 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
PIF1-203ENST00000558380 ARSAP15289 507 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 YWHAQP27348 245 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 SLC5A3P53794 718 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 AMPD2Q01433 879 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 TMEM196Q5HYL7 178 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 CPA6Q8N4T0 437 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 SUMF1Q8NBK3 374 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 ZMIZ2Q8NF64 920 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 ATP2A3Q93084 1043 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 TSG101Q99816 390 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 FAM124BQ9H5Z6 455 aaPredicted RBP16.56■□□□□ 0.24
PIF1-203ENST00000558380 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 RBM12Q9NTZ6 932 aaKnown RBP16.56■□□□□ 0.24
PIF1-203ENST00000558380 ANAPC1Q9H1A4 1944 aa16.56■□□□□ 0.24
PIF1-203ENST00000558380 CILPO75339 1184 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 AP1G2O75843 785 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 ZDHHC11BP0C7U3 371 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 CCDC130P13994 396 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 MXI1P50539 228 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 TUBP50607 506 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 PMS1P54277 932 aaKnown RBP16.55■□□□□ 0.24
PIF1-203ENST00000558380 NRLP54845 237 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 FKBP3Q00688 224 aaKnown RBP16.55■□□□□ 0.24
PIF1-203ENST00000558380 FOXR2Q6PJQ5 311 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 TSSK4Q6SA08 328 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 Q6ZS52 159 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 CCDC150Q8NCX0 1101 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 FBXL13Q8NEE6 735 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 SLC2A14Q8TDB8 520 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 EEF2KMTQ96G04 330 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 TWNKQ96RR1 684 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 HNRNPABQ99729 332 aaKnown RBP16.55■□□□□ 0.24
PIF1-203ENST00000558380 SMOQ99835 787 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 MED10Q9BTT4 135 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 NT5C1AQ9BXI3 368 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 RNF38Q9H0F5 515 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 ECT2Q9H8V3 914 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 PNPLA8Q9NP80 782 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 DUS2Q9NX74 493 aaKnown RBP16.55■□□□□ 0.24
PIF1-203ENST00000558380 COQ4Q9Y3A0 265 aa16.55■□□□□ 0.24
PIF1-203ENST00000558380 HELZP42694 1942 aaKnown RBP16.55■□□□□ 0.24
PIF1-203ENST00000558380 CACNA1IQ9P0X4 2223 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 LEFTY2O00292 366 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 BEST1O76090 585 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 TRIM21P19474 475 aaKnown RBP16.54■□□□□ 0.24
PIF1-203ENST00000558380 GJA4P35212 333 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 PPP1R2P41236 205 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 CXCL12P48061 93 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 IFNAR2P48551 515 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 SATB1Q01826 763 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 ORC1Q13415 861 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 ANKRD40Q6AI12 368 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 FSTL4Q6MZW2 842 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 TTC39CQ8N584 583 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 C12orf29Q8N999 325 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 SCAMP5Q8TAC9 235 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 ATRIPQ8WXE1 791 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 SEMA4DQ92854 862 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 ERCC4Q92889 916 aaPredicted RBP16.54■□□□□ 0.24
PIF1-203ENST00000558380 FBXO32Q969P5 355 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 DUSP9Q99956 384 aaKnown RBP16.54■□□□□ 0.24
PIF1-203ENST00000558380 EPC1Q9H2F5 836 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 WNT6Q9Y6F9 365 aa16.54■□□□□ 0.24
PIF1-203ENST00000558380 K7ESF4 209 aa16.53■□□□□ 0.24
PIF1-203ENST00000558380 FAM200BP0CF97 657 aa16.53■□□□□ 0.24
PIF1-203ENST00000558380 HOXA6P31267 233 aa16.53■□□□□ 0.24
PIF1-203ENST00000558380 GRSF1Q12849 480 aaKnown RBP eCLIP16.53■□□□□ 0.24
PIF1-203ENST00000558380 CLEC20AQ6ZU45 233 aa16.53■□□□□ 0.24
PIF1-203ENST00000558380 DDX42Q86XP3 938 aaKnown RBP eCLIP16.53■□□□□ 0.24
PIF1-203ENST00000558380 EXOC4Q96A65 974 aa16.53■□□□□ 0.24
PIF1-203ENST00000558380 DHTKD1Q96HY7 919 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms