RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ATF3P18847 181 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF33BQ06732 778 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 THG1LQ9NWX6 298 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 GRHL1Q9NZI5 618 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 KLQ9UEF7 1012 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 ADGRA3Q8IWK6 1321 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 A0A0G2JLW4 131 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 POTECB2RU33 542 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF701M0R085 212 aaPredicted RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SRGAP2CP0DJJ0 459 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 RPL9P32969 192 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 GUCY1A2P33402 732 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 FAM26DQ5JW98 314 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 OGFRL1Q5TC84 451 aaPredicted RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 KRT40Q6A162 431 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SCARA3Q6AZY7 606 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 CYP20A1Q6UW02 462 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 DSG4Q86SJ6 1040 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 USP37Q86T82 979 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 DNAAF5Q86Y56 855 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 RASGEF1CQ8N431 466 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 RASGRP4Q8TDF6 673 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 HEXIM2Q96MH2 286 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 HIPK3Q9H422 1215 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 NTN4Q9HB63 628 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 CPNE7Q9UBL6 633 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 TRAF6Q9Y4K3 522 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 TACC3Q9Y6A5 838 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 IL13P35225 146 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 ARHGDIBP52566 201 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 ATN1P54259 1190 aaPredicted RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 INAVAQ3KP66 663 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 FRA10AC1Q70Z53 315 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 SRBD1Q8N5C6 995 aaKnown RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 HES6Q96HZ4 224 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 SAMD11Q96NU1 681 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 MAU2Q9Y6X3 613 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 MYH3P11055 1940 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 PI4KAP2A4QPH2 592 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 H3BNX3 289 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 MUSKO15146 869 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 EXTL3O43909 919 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 HLA-DRAP01903 254 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 FAM58BPP0C7Q3 252 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 TGM1P22735 817 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 GRK2P25098 689 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 RCAN1P53805 252 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 MRPS9P82933 396 aaKnown RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 IL9RQ01113 521 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 GALNT2Q10471 571 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 APOA5Q6Q788 366 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 OTOAQ7RTW8 1153 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 PI4KAP1Q8N8J0 262 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 ASCC1Q8N9N2 400 aaKnown RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 CATSPER1Q8NEC5 780 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 RAB3IL1Q8TBN0 382 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 HDAC2Q92769 488 aaKnown RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 MARC2Q969Z3 335 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 SLC39A13Q96H72 371 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 MKRN2Q9H000 416 aaKnown RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 RAB26Q9ULW5 256 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 PCDHGA10Q9Y5H3 936 aa11.46□□□□□ -0.57
SEMA4B-204ENST00000558065 FGFR1P11362 822 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 TRIP10Q15642 601 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 C1orf146Q5VVC0 180 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 ANKRD26P1Q6NSI1 321 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 METTL13Q8N6R0 699 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNF398Q8TD17 642 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 ANKS1AQ92625 1134 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 DCUN1D1Q96GG9 259 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 ZKSCAN3Q9BRR0 538 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 ACAT2Q9BWD1 397 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 EMILIN2Q9BXX0 1053 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 CSRNP2Q9H175 543 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 TIGARQ9NQ88 270 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 MCM9Q9NXL9 1143 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 NR2E1Q9Y466 385 aa11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 CLTCQ00610 1675 aaKnown RBP11.46□□□□□ -0.58
SEMA4B-204ENST00000558065 MAST3O60307 1309 aa11.45□□□□□ -0.58
SEMA4B-204ENST00000558065 CYP26A1O43174 497 aa11.45□□□□□ -0.58
SEMA4B-204ENST00000558065 C8BP07358 591 aa11.45□□□□□ -0.58
SEMA4B-204ENST00000558065 NDST2P52849 883 aa11.45□□□□□ -0.58
SEMA4B-204ENST00000558065 RACK1P63244 317 aaKnown RBP11.45□□□□□ -0.58
SEMA4B-204ENST00000558065 GNA12Q03113 381 aa11.45□□□□□ -0.58
SEMA4B-204ENST00000558065 BNIP3Q12983 259 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms