RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 CHD9Q3L8U1 2897 aa6.42□□□□□ -1.38
FOXN3-218ENST00000557718 COL4A4P53420 1690 aaPredicted RBP6.42□□□□□ -1.38
FOXN3-218ENST00000557718 DOCK6Q96HP0 2047 aa6.42□□□□□ -1.38
FOXN3-218ENST00000557718 PPEF2O14830 753 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 ZNF623O75123 536 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 NOL4O94818 638 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 LDHAP00338 332 aaKnown RBP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 SERPINC1P01008 464 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TIMP1P01033 207 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 AFPP02771 609 aaKnown RBP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CLTAP09496 248 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CSF2RAP15509 400 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 SLC9A1P19634 815 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CDK11BP21127 795 aaKnown RBP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 GCLMP48507 274 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 GATMP50440 423 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 GUCY2FP51841 1108 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 EPHB4P54760 987 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TPM4P67936 248 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 ENPEPQ07075 957 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 GOLGA8FQ08AF8 430 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 GOLGA8DPQ0D2H9 430 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 SYCP1Q15431 976 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 ZBTB6Q15916 424 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 ZACNQ401N2 412 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TDRD10Q5VZ19 366 aaKnown RBP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TWF2Q6IBS0 349 aaKnown RBP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 JADE1Q6IE81 842 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 LRFN4Q6PJG9 635 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 ECHDC2Q86YB7 292 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CREBRFQ8IUR6 639 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TAS1R2Q8TE23 839 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 PPP1R9BQ96SB3 815 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 ADAM2Q99965 735 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CRACR2AQ9BSW2 395 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 APOL6Q9BWW8 343 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 FOXQ1Q9C009 403 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 GANQ9H2C0 597 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 MMRN2Q9H8L6 949 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 KIAA1586Q9HCI6 787 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CHST12Q9NRB3 414 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 FAM53CQ9NYF3 392 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 LMCD1Q9NZU5 365 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 MAGEC2Q9UBF1 373 aaPredicted RBP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 CACNG4Q9UBN1 327 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TUBGCP4Q9UGJ1 667 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 SIX4Q9UIU6 781 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 COQ4Q9Y3A0 265 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.41□□□□□ -1.38
FOXN3-218ENST00000557718 TRANK1O15050 2925 aa6.41□□□□□ -1.38
FOXN3-218ENST00000557718 RANBP2P49792 3224 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 A0A0U1RQF3 1178 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 A0A1W2PQC6 194 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 PRAMEF27A3QJZ7 478 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 GTPBP10A4D1E9 387 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ENPP3O14638 875 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 PMM2O15305 246 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 INPPL1O15357 1258 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 CST3P01034 146 aaPredicted RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 GYPCP04921 128 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ACRP10323 421 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 DLATP10515 647 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ACTN1P12814 892 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 PON1P27169 355 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 MXI1P50539 228 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 MYL7Q01449 175 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 POU5F1Q01860 360 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 UBXN1Q04323 297 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 GLRA4Q5JXX5 417 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 CLLU1OSQ5K130 101 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 TCERG1LQ5VWI1 586 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 FYB2Q5VWT5 728 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 E4F1Q66K89 784 aaPredicted RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 MFSD5Q6N075 450 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 GJB7Q6PEY0 223 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 TMC6Q7Z403 805 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 DEFB128Q7Z7B8 93 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 WDR49Q8IV35 697 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ARHGEF19Q8IW93 802 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 C7orf61Q8IZ16 206 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 OLIG1Q8TAK6 271 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 KAT5Q92993 513 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 C18orf25Q96B23 403 aaPredicted RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ACAP3Q96P50 834 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 PPP1R10Q96QC0 940 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ADPGKQ9BRR6 497 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 MTMR12Q9C0I1 747 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 C12orf49Q9H741 205 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 RPF1Q9H9Y2 349 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 FBRSQ9HAH7 460 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 APOBEC3GQ9HC16 384 aaKnown RBP6.4□□□□□ -1.38
FOXN3-218ENST00000557718 TMEM8AQ9HCN3 771 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 SEMA3GQ9NS98 782 aa6.4□□□□□ -1.38
FOXN3-218ENST00000557718 ITIH6Q6UXX5 1313 aa6.4□□□□□ -1.39
FOXN3-218ENST00000557718 ANAPC1Q9H1A4 1944 aa6.4□□□□□ -1.39
FOXN3-218ENST00000557718 CHD7Q9P2D1 2997 aa6.39□□□□□ -1.39
FOXN3-218ENST00000557718 SMIM28A0A1B0GU29 152 aa6.39□□□□□ -1.39
FOXN3-218ENST00000557718 ARL5CA6NH57 179 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms