RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ZNF280DQ6N043 979 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 COLGALT2Q8IYK4 626 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 SDR16C5Q8N3Y7 309 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 GLIS1Q8NBF1 620 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 CCDC150Q8NCX0 1101 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 SLC30A5Q8TAD4 765 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 CYP2W1Q8TAV3 490 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 DOT1LQ8TEK3 1739 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 ASB12Q8WXK4 309 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 CPA5Q8WXQ8 436 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 ZNF622Q969S3 477 aaKnown RBP eCLIP5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 MAGEB5Q9BZ81 275 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.61□□□□□ -1.513e-6■■■■□ 22.8
MTHFD1-216ENST00000557539 C11orf54Q9H0W9 315 aaPredicted RBP5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 CHST8Q9H2A9 424 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 UNC45AQ9H3U1 944 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 RASSF1Q9NS23 344 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 SIDT1Q9NXL6 827 aaKnown RBP5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 FAM53CQ9NYF3 392 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 ZDHHC8Q9ULC8 765 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 DMXL1Q9Y485 3027 aa5.61□□□□□ -1.51
MTHFD1-216ENST00000557539 SPEGQ15772 3267 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ABCC11Q96J66 1382 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 TISP43B9A030 160 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 B9A039 149 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 WNT10BO00744 389 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ABLIM1O14639 778 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 TCERG1O14776 1098 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 GASTP01350 101 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 KRT1P04264 644 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 NCAM1P13591 858 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ELF1P32519 619 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 KRT9P35527 623 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ALDH1A3P47895 512 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ITGA1P56199 1179 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 FOXO4P98177 505 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 PDE1CQ14123 709 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 RTP5Q14D33 572 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 PKN1Q16512 942 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ATP2B3Q16720 1220 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ARHGAP15Q53QZ3 475 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 PRAMEF14Q5SWL7 426 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ANKRD45Q5TZF3 282 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 LMBRD2Q68DH5 695 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 LIN54Q6MZP7 749 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 MZT2BQ6NZ67 158 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 BORAQ6PGQ7 559 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 CLEC14AQ86T13 490 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 TBC1D1Q86TI0 1168 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 LRRTM4Q86VH4 590 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 HEATR4Q86WZ0 1026 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 PLXDC1Q8IUK5 500 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 TMTC1Q8IUR5 882 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 PRSS33Q8NF86 280 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 OR56A3Q8NH54 315 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 SMARCC2Q8TAQ2 1214 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 MDM1Q8TC05 714 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 CASKIN2Q8WXE0 1202 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 HDAC2Q92769 488 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 RILPL2Q969X0 211 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 SLC38A3Q99624 504 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 KCNK12Q9HB15 430 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 RIC8AQ9NPQ8 531 aa5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 ADARB2Q9NS39 739 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 SCAF8Q9UPN6 1271 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-216ENST00000557539 GVINP1Q7Z2Y8 2422 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 ITIH6Q6UXX5 1313 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 A6NLC8 198 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 RASSF9O75901 435 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 KLHL18O94889 574 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 KNG1P01042 644 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 RAP2AP10114 183 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 TXNP10599 105 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 XBP1P17861 261 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 CAPN3P20807 821 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 KLRC1P26715 233 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 GABRB3P28472 473 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 YBX1P67809 324 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 TFF2Q03403 129 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 DUSP2Q05923 314 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 ADAM15Q13444 863 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 ADCK5Q3MIX3 580 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 PABPC1LQ4VXU2 614 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 FBXO47Q5MNV8 452 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 USP49Q70CQ1 688 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 FTSJ3Q8IY81 847 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 TMEFF1Q8IYR6 380 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 RTKN2Q8IZC4 609 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 SLC15A4Q8N697 577 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 C1orf131Q8NDD1 294 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 BHLHE22Q8NFJ8 381 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 SPATA18Q8TC71 538 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 STT3BQ8TCJ2 826 aa5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 IPCEF1Q8WWN9 437 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 GFM2Q969S9 779 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 PYM1Q9BRP8 204 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-216ENST00000557539 OSBPL5Q9H0X9 879 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms