RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ABHD5Q8WTS1 349 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 HAS1Q92839 578 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 KAZALD1Q96I82 304 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 RNF26Q9BY78 433 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ALOXE3Q9BYJ1 711 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 DEF6Q9H4E7 631 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 SERTAD4Q9NUC0 356 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 PRDM4Q9UKN5 801 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ADGRA2Q96PE1 1338 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ADM5C9JUS6 153 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 SGPL1O95470 568 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 TPH1P17752 444 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ABCB4P21439 1286 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 MCCP23508 829 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 GATA3P23771 443 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 MST1P26927 711 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 PXNP49023 591 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-212ENST00000557538 KRTAP10-2P60368 255 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 VAMP2P63027 116 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 SETQ01105 290 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-212ENST00000557538 RESTQ13127 1097 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 LY6G5CQ5SRR4 150 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 C10orf62Q5T681 223 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-212ENST00000557538 FAXCQ5TGI0 409 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 FAM90A2PQ658T7 463 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 LAYNQ6UX15 382 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 LDHAL6AQ6ZMR3 332 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 BBS12Q6ZW61 710 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF276Q8N554 614 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 CCDC150Q8NCX0 1101 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 CPEB3Q8NE35 698 aaKnown RBP2.03□□□□□ -2.08
HIF1A-212ENST00000557538 CHST13Q8NET6 341 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 GCC1Q96CN9 775 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 PBKQ96KB5 322 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 VN1R3Q9BXE9 311 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 TEX101Q9BY14 249 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 CXorf36Q9H7Y0 433 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 EHD3Q9NZN3 535 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 TRPM5Q9NZQ8 1165 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 ST6GALNAC2Q9UJ37 374 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 SORCS3Q9UPU3 1222 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 GPR52Q9Y2T5 361 aa2.03□□□□□ -2.08
HIF1A-212ENST00000557538 FAM234BA2RU67 622 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 SAC3D1A6NKF1 404 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 GCOM1H8Y6P7 765 aaPredicted RBP2.03□□□□□ -2.09
HIF1A-212ENST00000557538 DLDP09622 509 aaKnown RBP2.03□□□□□ -2.09
HIF1A-212ENST00000557538 IGFBP2P18065 325 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 PNLIPRP1P54315 467 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 MC2RQ01718 297 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 GUCY1B3Q02153 619 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 FPGSQ05932 587 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 POU5F1BQ06416 359 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 STARD3Q14849 445 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 ST3GAL2Q16842 350 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 TBC1D25Q3MII6 688 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 TUBB8Q3ZCM7 444 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 HSP90AB4PQ58FF6 505 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 FBXO47Q5MNV8 452 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 ABLIM2Q6H8Q1 611 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 CYP26C1Q6V0L0 522 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 ANKRD18AQ8IVF6 992 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 HERC6Q8IVU3 1022 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 C1orf210Q8IVY1 113 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 LRRC71Q8N4P6 559 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 USP38Q8NB14 1042 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 PARD3BQ8TEW8 1205 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 SNX19Q92543 992 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 EXTL1Q92935 676 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 APOL5Q9BWW9 433 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 EPC1Q9H2F5 836 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 FOXJ2Q9P0K8 574 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 EIF2B4Q9UI10 523 aaKnown RBP2.03□□□□□ -2.09
HIF1A-212ENST00000557538 RIMKLBQ9ULI2 386 aa2.03□□□□□ -2.09
HIF1A-212ENST00000557538 ZMYND8Q9ULU4 1186 aaPredicted RBP2.03□□□□□ -2.09
HIF1A-212ENST00000557538 CREB3O43889 395 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 PROP1O75360 226 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SPDEFO95238 335 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TFRCP02786 760 aaKnown RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 ADRB1P08588 477 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 DHRS4L1P0CG22 281 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 MYCLP12524 364 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 PTDSS1P48651 473 aaKnown RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 HSD11B2P80365 405 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 DNASE1L3Q13609 305 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 GEN1Q17RS7 908 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TTC22Q5TAA0 569 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 CCDC28AQ8IWP9 274 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SLC15A3Q8IY34 581 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 SMAP1Q8IYB5 467 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 NRSN1Q8IZ57 195 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF527Q8NB42 609 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 CPT1CQ8TCG5 803 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 PNISRQ8TF01 805 aaKnown RBP2.02□□□□□ -2.09
HIF1A-212ENST00000557538 ATRIPQ8WXE1 791 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 TBC1D5Q92609 795 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 MAGEH1Q9H213 219 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 LUZP4Q9P127 313 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 CDYLQ9Y232 598 aa2.02□□□□□ -2.09
HIF1A-212ENST00000557538 MTO1Q9Y2Z2 717 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms