RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
SHMT2-232ENST00000557487 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
SHMT2-232ENST00000557487 IQCGQ9H095 443 aaKnown RBP17.01■□□□□ 0.31
SHMT2-232ENST00000557487 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
SHMT2-232ENST00000557487 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
SHMT2-232ENST00000557487 SCN4AP35499 1836 aa17.01■□□□□ 0.31
SHMT2-232ENST00000557487 WDR81Q562E7 1941 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 FCHO1O14526 889 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 CHADO15335 359 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 MED7O43513 233 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 BANF1O75531 89 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 TOMM70O94826 608 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 TMEM63AO94886 807 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 ARL2P36404 184 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 PGM1P36871 562 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 ACTR2P61160 394 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 DBN1Q16643 649 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 RINLQ6ZS11 566 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 SESTD1Q86VW0 696 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 SLC26A11Q86WA9 606 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 GALNT15Q8N3T1 639 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 PDCD7Q8N8D1 485 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 OR5B17Q8NGF7 314 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 HAPLN2Q9GZV7 340 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 WWP1Q9H0M0 922 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 RSAD1Q9HA92 442 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 PAPOLBQ9NRJ5 636 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 DDX43Q9NXZ2 648 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 PGAP2Q9UHJ9 254 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 SORCS3Q9UPU3 1222 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 PPME1Q9Y570 386 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 ENO4A6NNW6 628 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 COPEO14579 308 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 TRDMT1O14717 391 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 LRCH4O75427 683 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 KRT36O76013 467 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 KRT37O76014 449 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 SUPT20HL2P0C7V6 817 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 MYL2P10916 166 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 KRT3P12035 628 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 SSTR3P32745 418 aaPredicted RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 GDF10P55107 478 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 EIF3EP60228 445 aaKnown RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 DPYSL3Q14195 570 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 RCN2Q14257 317 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 GNPTABQ3T906 1256 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 SUPT20HL1Q3ZLR7 823 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 OR52E8Q6IFG1 317 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 CCDC60Q8IWA6 550 aaPredicted RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 CMASQ8NFW8 434 aaPredicted RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 FAM111AQ96PZ2 611 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 ZNF184Q99676 751 aaPredicted RBP17■□□□□ 0.31
SHMT2-232ENST00000557487 TMEM39BQ9GZU3 492 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 CISHQ9NSE2 258 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 GPRC5DQ9NZD1 345 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 TEX264Q9Y6I9 313 aa17■□□□□ 0.31
SHMT2-232ENST00000557487 TCRBV9S1A1TA0A576 114 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 GOLGA8RI6L899 631 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 TBX10O75333 385 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 CIB2O75838 187 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 BRD2P25440 801 aaKnown RBP16.99■□□□□ 0.31
SHMT2-232ENST00000557487 RFC5P40937 340 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
SHMT2-232ENST00000557487 OAZ1P54368 228 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 MTERF2Q49AM1 385 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
SHMT2-232ENST00000557487 WDTC1Q8N5D0 677 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 TTC17Q96AE7 1141 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 MTBPQ96DY7 904 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 IFT43Q96FT9 208 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 GPAMQ9HCL2 828 aa16.99■□□□□ 0.31
SHMT2-232ENST00000557487 LRRIQ4A6NIV6 560 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 CAPN14A8MX76 684 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 SNUPNO95149 360 aaKnown RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 SNRPAP09012 282 aaKnown RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 BGNP21810 368 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 ELK3P41970 407 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 GMPSP49915 693 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 SESN3P58005 492 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 DYNLT1P63172 113 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 FAAP100Q0VG06 881 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 BAATQ14032 418 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 FAM47CQ5HY64 1035 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 NRG4Q8WWG1 115 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 SERAC1Q96JX3 654 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 TARS2Q9BW92 718 aaKnown RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 C1orf21Q9H246 121 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 FBXO6Q9NRD1 293 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-232ENST00000557487 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 CHMP2BQ9UQN3 213 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 SPDYE5A6NIY4 337 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 RBP3P10745 1247 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 PYGBP11216 843 aa16.98■□□□□ 0.31
SHMT2-232ENST00000557487 EPHX2P34913 555 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms