RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PPP2R3AQ06190 1150 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ST3GAL1Q11201 340 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 BFSP1Q12934 665 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 STRN3Q13033 797 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ORC2Q13416 577 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 DMC1Q14565 340 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 KARSQ15046 597 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ANKRD1Q15327 319 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 SAFBQ15424 915 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 MGAT5BQ3V5L5 792 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 PMS2CLQ68D20 193 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 KIAA1211LQ6NV74 962 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 SYT13Q7L8C5 426 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 KCNK18Q7Z418 384 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 PHTF2Q8N3S3 785 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 C4orf32Q8N8J7 132 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 MAB21L3Q8N8X9 362 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 IGSF22Q8N9C0 903 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 STKLD1Q8NE28 680 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 RPLP0P6Q8NHW5 317 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 EZH1Q92800 747 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 SENP8Q96LD8 212 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 P2RY13Q9BPV8 354 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 NTPCRQ9BSD7 190 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ZCWPW1Q9H0M4 648 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 C17orf75Q9HAS0 396 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TMEM9BQ9NQ34 198 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 EBF1Q9UH73 591 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TBX20Q9UMR3 447 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 DNM3Q9UQ16 869 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 INVSQ9Y283 1065 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 LAMA5O15230 3695 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CACNA1EQ15878 2313 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TSC2P49815 1807 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 IGSF10Q6WRI0 2623 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 LOC400499M0QZD8 3231 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ABCA7Q8IZY2 2146 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 HYAL3O43820 417 aaPredicted RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 F11P03951 625 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 NFICP08651 508 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 PLS3P13797 630 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 HMGA1P17096 107 aaKnown RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 BCKDHBP21953 392 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 GUCY2CP25092 1073 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 CDC25AP30304 524 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 GJA4P35212 333 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 DGKEP52429 567 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 NLRP12P59046 1061 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 IRX4P78413 519 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 AMPD2Q01433 879 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 RING1Q06587 406 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 PDIA5Q14554 519 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 TAF12Q16514 161 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 UAP1L1Q3KQV9 507 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 FBXO43Q4G163 708 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 SPATA1Q5VX52 437 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 JADE1Q6IE81 842 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 CC2D1AQ6P1N0 951 aaPredicted RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ZPBP2Q6X784 338 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 CYP2U1Q7Z449 544 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 LRRTM3Q86VH5 581 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 FMNL3Q8IVF7 1028 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 VWA5B2Q8N398 1253 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 DEFB124Q8NES8 71 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 TSTD1Q8NFU3 115 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 NANOS1Q8WY41 292 aaKnown RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ACDQ96AP0 544 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 BICD1Q96G01 975 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 CITED4Q96RK1 184 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 MMTAG2Q9BU76 263 aaKnown RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 TPSD1Q9BZJ3 242 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 FOXP1Q9H334 677 aaPredicted RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ECT2Q9H8V3 914 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 KIF9Q9HAQ2 790 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 TDP1Q9NUW8 608 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ABI2Q9NYB9 513 aaPredicted RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ZMYM5Q9UJ78 669 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 PRKAB1Q9Y478 270 aa6.31□□□□□ -1.4
VPS33B-207ENST00000557470 SMG1Q96Q15 3661 aaKnown RBP6.31□□□□□ -1.4
VPS33B-207ENST00000557470 ANO9A1A5B4 782 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ANTXRLA6NF34 631 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 PIRO00625 290 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 HNRNPDLO14979 420 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 XPOTO43592 962 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 SH3BP5O60239 455 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 TADA3O75528 432 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 CYP11A1P05108 521 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ADRB2P07550 413 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 HAPLN1P10915 354 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 RHOQP17081 205 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 DDX6P26196 483 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 TRAPPC10P48553 1259 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 GPR15P49685 360 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms