RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 ZSCAN30Q86W11 494 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 PDSS2Q86YH6 399 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 STON2Q8WXE9 905 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 TNPO1Q92973 898 aaKnown RBP3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 RADILQ96JH8 1075 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 PRPF18Q99633 342 aaKnown RBP3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 DPH1Q9BZG8 443 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 USP44Q9H0E7 712 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 PABPC3Q9H361 631 aaKnown RBP3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 RETREG1Q9H6L5 497 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 JMJD4Q9H9V9 463 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLAMF7Q9NQ25 335 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 TM7SF3Q9NS93 570 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 PIH1D1Q9NWS0 290 aaKnown RBP3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SRRDQ9UH36 339 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF112Q9UJU3 913 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 FRMD4BQ9Y2L6 1034 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SH3BP1Q9Y3L3 701 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 PI4KAP2A4QPH2 592 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CXorf49A8MYA2 514 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 MASP2O00187 686 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 RNASET2O00584 256 aaKnown RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 HNRNPDLO14979 420 aaKnown RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 THAP12O43422 761 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 DHX16O60231 1041 aaKnown RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 PTP4A3O75365 173 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 MATN4O95460 622 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 MLYCDO95822 493 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ADRB2P07550 413 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 PECAM1P16284 738 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CST5P28325 142 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 PCSK1P29120 753 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 HOXC13P31276 330 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 PIK3CGP48736 1102 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CCT4P50991 539 aaKnown RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ADAM17P78536 824 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 UBE3AQ05086 875 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CHRNDQ07001 517 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF844Q08AG5 666 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ICAM4Q14773 271 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CDC37Q16543 378 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ADCK5Q3MIX3 580 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 NRN1LQ496H8 165 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CFAP58Q5T655 872 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ANKRD45Q5TZF3 282 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF585AQ6P3V2 769 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 KLHL17Q6TDP4 642 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZDHHC24Q6UX98 284 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 B4GALNT4Q76KP1 1039 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 RNF44Q7L0R7 432 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 TMPRSS6Q8IU80 811 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CHCHD4Q8N4Q1 142 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 VGLL2Q8N8G2 317 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 REPS2Q8NFH8 660 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CREB3L4Q8TEY5 395 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 KBTBD7Q8WVZ9 684 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 RSPH1Q8WYR4 309 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 RFFLQ8WZ73 363 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 SUCLG2Q96I99 432 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 TWNKQ96RR1 684 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 PNKPQ96T60 521 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 MNTQ99583 582 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 NDC1Q9BTX1 674 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 SSBP3Q9BWW4 388 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 GPR63Q9BZJ6 419 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 TAF1DQ9H5J8 278 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 EPS8L2Q9H6S3 715 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF703Q9H7S9 590 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 CD248Q9HCU0 757 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 KRT84Q9NSB2 600 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 HAUS2Q9NVX0 235 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 JKAMPQ9P055 326 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 ADD3Q9UEY8 706 aaKnown RBP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 MYRFQ9Y2G1 1151 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 NOX1Q9Y5S8 564 aa3.55□□□□□ -1.84
HMGB1P14-201ENST00000557424 RSF1Q96T23 1441 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 CLCA1A8K7I4 914 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 B4DLN1 442 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 H0Y3Z8 333 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 PYCARD-AS1I3L0S3 204 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 KIAA0391O15091 583 aaKnown RBP3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 DNPH1O43598 174 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 KRT38O76015 456 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 ACTL6BO94805 426 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 CD1AP06126 327 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC3A2P08195 630 aaKnown RBP3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 CLTBP09497 229 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 XRCC6P12956 609 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF20P17024 532 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 KLRK1P26718 216 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 ABCD3P28288 659 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 MCM7P33993 719 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 HOXD13P35453 343 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 ALDH1A3P47895 512 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 AVPR1BP47901 424 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 RAP2BP61225 183 aa3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 IFI35P80217 286 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P14-201ENST00000557424 ATP8B2P98198 1209 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms