RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 MON1AQ86VX9 555 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 UBALD2Q8IYN6 164 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 MAB21L3Q8N8X9 362 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 PDZD8Q8NEN9 1154 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 TFAP2BQ92481 460 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 FBXO32Q969P5 355 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 ELSPBP1Q96BH3 223 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 SLC46A2Q9BY10 475 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 FBXO44Q9H4M3 255 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 TRPV4Q9HBA0 871 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 ZFP14Q9HCL3 533 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 PLCB1Q9NQ66 1216 aa14.36□□□□□ -0.11
SHMT2-228ENST00000557302 AJAP1Q9UKB5 411 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-228ENST00000557302 HHLA1C9JL84 531 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 UCHL3P15374 230 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 FCARP24071 287 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 WEE1P30291 646 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 AVPR1AP37288 418 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 VIPR2P41587 438 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 ZXDAP98168 799 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 BST2Q10589 180 aaKnown RBP14.35□□□□□ -0.11
SHMT2-228ENST00000557302 RAPGEF1Q13905 1077 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 CNGA2Q16280 664 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 GPRIN1Q7Z2K8 1008 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 LUZP1Q86V48 1076 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 TTC30AQ86WT1 665 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 ARID3BQ8IVW6 561 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-228ENST00000557302 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 SLC44A3Q8N4M1 653 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 OVCA2Q8WZ82 227 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 EDAQ92838 391 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 E2F7Q96AV8 911 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 RPP25Q9BUL9 199 aaKnown RBP14.35□□□□□ -0.11
SHMT2-228ENST00000557302 UBXN6Q9BZV1 441 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 EPHX3Q9H6B9 360 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 TRPC7Q9HCX4 862 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 IL37Q9NZH6 218 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 DUSP12Q9UNI6 340 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.35□□□□□ -0.11
SHMT2-228ENST00000557302 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
SHMT2-228ENST00000557302 MYO10Q9HD67 2058 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 TRAV19A0A0A6YYK7 116 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 FAM92AA1XBS5 289 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 ZNF840PA6NDX5 716 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 GOLGA6L19H0YKK7 550 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 M0QYV0 167 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 DPYSL4O14531 572 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 XPO1O14980 1071 aaKnown RBP14.34□□□□□ -0.11
SHMT2-228ENST00000557302 MED7O43513 233 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 ABL1P00519 1130 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 CALCAP01258 141 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 SETSIPP0DME0 302 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 GNA15P30679 374 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 PDE6CP51160 858 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 KIF11P52732 1056 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 PDE4CQ08493 712 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 SYCP1Q15431 976 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 UBA3Q8TBC4 463 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 PCMTD1Q96MG8 357 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-228ENST00000557302 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 SMOC2Q9H3U7 446 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 TSPY26PQ9H489 355 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 FAM207AQ9NSI2 230 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-228ENST00000557302 SIK3Q9Y2K2 1263 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 DAAM1Q9Y4D1 1078 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 TRIOO75962 3097 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 NCANO14594 1321 aa14.34□□□□□ -0.11
SHMT2-228ENST00000557302 C2orf78A6NCI8 922 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 HEPACAM2A8MVW5 462 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 FOXN3O00409 490 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 CYP26A1O43174 497 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 THAP12O43422 761 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 NARSO43776 548 aaKnown RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 PRAMEF12O95522 483 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 CKMP06732 381 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 SRFP11831 508 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 PFKLP17858 780 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 PLA2G4AP47712 749 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 KLK7P49862 253 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 PTK2Q05397 1052 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 DRAP1Q14919 205 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 GPIHBP1Q8IV16 184 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 DEPDC1BQ8WUY9 529 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 NAA15Q9BXJ9 866 aaKnown RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 SMG9Q9H0W8 520 aaKnown RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 GANQ9H2C0 597 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 RTN4Q9NQC3 1192 aaKnown RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 OBP2AQ9NY56 170 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 GMIPQ9P107 970 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-228ENST00000557302 SCML2Q9UQR0 700 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.12
SHMT2-228ENST00000557302 TULP2O00295 520 aa14.32□□□□□ -0.12
SHMT2-228ENST00000557302 SERPINC1P01008 464 aa14.32□□□□□ -0.12
SHMT2-228ENST00000557302 USP17L7P0C7H9 530 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms