RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 POLR1DQ9Y2S0 133 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SYNMO15061 1565 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 FRMPD2Q68DX3 1309 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 M0QYV0 167 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 TYSND1Q2T9J0 566 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 COX4I2Q96KJ9 171 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 MFHAS1Q9Y4C4 1052 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 FARP2O94887 1054 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 FGAP02671 866 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RPLP2P05387 115 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 C18orf8Q96DM3 657 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CDK5RAP1Q96SZ6 601 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 PHB2Q99623 299 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 PIDD1Q9HB75 910 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SHROOM2Q13796 1616 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 A0A1W2PQ72 361 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RGS10O43665 173 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 VAV1P15498 845 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 COBLL1Q53SF7 1204 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 OLFML1Q6UWY5 402 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 STOX1Q6ZVD7 989 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 IFNEQ86WN2 208 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 KYQ8NBH2 561 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CNKSR1Q969H4 720 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 KLHL1Q9NR64 748 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CKLFQ9UBR5 152 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RUVBL2Q9Y230 463 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 ALDH3A2P51648 485 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RPS8P62241 208 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 VPS72Q15906 364 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SLC7A14Q8TBB6 771 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SLC9A6Q92581 669 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 ANAPC2Q9UJX6 822 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SORCS3Q9UPU3 1222 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CYP24A1Q07973 514 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 LAYNQ6UX15 382 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 KCTD14Q9BQ13 255 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TMEM138Q9NPI0 162 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SNX12Q9UMY4 172 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SMIM11AP58511 58 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CAMK2GQ13555 558 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 BHLHB9Q6PI77 547 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 FAM92BQ6ZTR7 304 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF605Q86T29 641 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 GUF1Q8N442 669 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 DCAF4Q8WV16 495 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF184Q99676 751 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 WWOXQ9NZC7 414 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 GPN3Q9UHW5 284 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SYNPO2Q9UMS6 1093 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SNX13Q9Y5W8 968 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 OR14I1A6ND48 311 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 KMOO15229 486 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 BMP3P12645 472 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ATP6V1B2P21281 511 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 RPS6KA3P51812 740 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ZDHHC13Q8IUH4 622 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ZC3H10Q96K80 434 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TRIM2Q9C040 744 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SLC40A1Q9NP59 571 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SNAP23O00161 211 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 HPCAL1P37235 193 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TIMM10P62072 90 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PPIL6Q8IXY8 311 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 POMGNT2Q8NAT1 580 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 UXS1Q8NBZ7 420 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ITIH6Q6UXX5 1313 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ERVV-2B6SEH9 535 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 NCAM2O15394 837 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PAX3P23760 479 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 OLFML2AQ68BL7 652 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CSNK2BP67870 215 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TMEM26Q6ZUK4 368 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TRIM48Q8IWZ4 208 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 MLXQ9UH92 298 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 VPS26AO75436 327 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 RECQL5O94762 991 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 DLG4P78352 724 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 OTUD4Q01804 1114 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CCDC184Q52MB2 194 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SYDE2Q5VT97 1194 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 GRHL2Q6ISB3 625 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 EIF3MQ7L2H7 374 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PID1Q7Z2X4 250 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 GPALPP1Q8IXQ4 340 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TP53INP1Q96A56 240 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PAGE5Q96GU1 130 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 MOV10Q9HCE1 1003 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TAGLN3Q9UI15 199 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 RFX7Q2KHR2 1363 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ABLIM1O14639 778 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms