RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 KBTBD7Q8WVZ9 684 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 CEP295NLQ96MC4 621 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 CBWD1Q9BRT8 395 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 ZDHHC4Q9NPG8 344 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 CFAP97Q9P2B7 532 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 MSRB2Q9Y3D2 182 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
SNX6-209ENST00000557265 CACNA1EQ15878 2313 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 A0A0A0MRY4 1105 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 TCRBV21S2A2A0A5A6 115 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 ADAM23O75077 832 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 CFIP05156 583 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 GAP43P17677 238 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
SNX6-209ENST00000557265 GRIA2P42262 883 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 KIR2DL1P43626 348 aaPredicted RBP13.13□□□□□ -0.31
SNX6-209ENST00000557265 PPP3CCP48454 512 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 CASP5P51878 434 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 RESTQ13127 1097 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
SNX6-209ENST00000557265 ACAP1Q15027 740 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
SNX6-209ENST00000557265 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 DEFB119Q8N690 84 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 KIAA1958Q8N8K9 716 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 DNAJC19Q96DA6 116 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 PCED1BQ96HM7 432 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 ANKRD36BP1Q96IX9 119 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 TTLL2Q9BWV7 592 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 GTPBP2Q9BX10 602 aaKnown RBP13.13□□□□□ -0.31
SNX6-209ENST00000557265 FSCN3Q9NQT6 498 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 INTS13Q9NVM9 706 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 PILRBQ9UKJ0 227 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
SNX6-209ENST00000557265 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 F8VP50 259 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 TRIM66O15016 1216 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 OLFM2O95897 454 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 ADH1CP00326 375 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 ADH5P11766 374 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 DPP6P42658 865 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 TNFRSF4P43489 277 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 ATXN3P54252 364 aaPredicted RBP13.12□□□□□ -0.31
SNX6-209ENST00000557265 NOP14P78316 857 aaKnown RBP13.12□□□□□ -0.31
SNX6-209ENST00000557265 KDSRQ06136 332 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 TAF10Q12962 218 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 HDDC3Q8N4P3 179 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 ANK1P16157 1881 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
SNX6-209ENST00000557265 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 AP5Z1O43299 807 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 OAS1P00973 400 aaKnown RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 TNNC2P02585 160 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 IDEP14735 1019 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 HOXD12P35452 270 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 DUOXA1Q1HG43 343 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 DUOXA2Q1HG44 320 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 MDH1BQ5I0G3 518 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 TDRD10Q5VZ19 366 aaKnown RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
SNX6-209ENST00000557265 SV2BQ7L1I2 683 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 HS2ST1Q7LGA3 356 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 FGFBP2Q9BYJ0 223 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 SNX25Q9H3E2 840 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
SNX6-209ENST00000557265 DSPP15924 2871 aaKnown RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 H0Y626 953 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 OPHN1O60890 802 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 PRPF6O94906 941 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms