RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 PLP2Q04941 152 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 EFEMP1Q12805 493 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SF3A2Q15428 464 aaKnown RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SEC23AQ15436 765 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 RTP2Q5QGT7 225 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 IFIT1BQ5T764 474 aaKnown RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 FAM160B1Q5W0V3 765 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 PAQR3Q6TCH7 311 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SPATA31D4Q6ZUB0 917 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 TPRG1Q6ZUI0 275 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 GET4Q7L5D6 327 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 PALB2Q86YC2 1186 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 HOMER1Q86YM7 354 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 JAMLQ86YT9 394 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 RNF168Q8IYW5 571 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SPEM1Q8N4L4 309 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 TMEM52Q8NDY8 209 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 ST13P5Q8NFI4 369 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 NKD1Q969G9 470 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 MXRA8Q9BRK3 442 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SDF4Q9BRK5 362 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 UBAC1Q9BSL1 405 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SCNM1Q9BWG6 230 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 NT5C1AQ9BXI3 368 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SRRTQ9BXP5 876 aaKnown RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 PSTPIP2Q9H939 334 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 TRPV5Q9NQA5 729 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 GDE1Q9NZC3 331 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 FNIP2Q9P278 1114 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 DNAJB4Q9UDY4 337 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 ADAMTS1Q9UHI8 967 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 PCDHGA5Q9Y5G8 931 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 ACACAQ13085 2346 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 NEDD4P46934 1319 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 URB1O60287 2271 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 A0A1W2PQJ5 194 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 FAM221BA6H8Z2 402 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 B4E1Z4 1266 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 FFAR3O14843 346 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 DDHD2O94830 711 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 DBHP09172 617 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 GSTM1P09488 218 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 HNRNPA1P09651 372 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 MSL3P1P0C860 447 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 MYBP10242 640 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 CHRNB1P11230 501 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 CSRP1P21291 193 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 HOXA9P31269 272 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 FNTBP49356 437 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 GLUD2P49448 558 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 NOVA1P51513 510 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 SLURP1P55000 103 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 CORO7P57737 925 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 GRM4Q14833 912 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 CEP55Q53EZ4 464 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 ZFYVE27Q5T4F4 411 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 SWSAP1Q6NVH7 229 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 EFCAB12Q6NXP0 572 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 RTL10Q7L3V2 364 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 CACNA2D4Q7Z3S7 1137 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 GRASPQ7Z6J2 395 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 MRPL10Q7Z7H8 261 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 TEX2Q8IWB9 1127 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 LINC01465Q8N7H1 131 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 DNASE1L2Q92874 299 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 PGBD4Q96DM1 585 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 FAM227BQ96M60 508 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 MBOAT7Q96N66 472 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 MAP7D2Q96T17 732 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 BDH2Q9BUT1 245 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 PHF20Q9BVI0 1012 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 SLC12A9Q9BXP2 914 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 KRT23Q9C075 422 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 RNF38Q9H0F5 515 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 GBP3Q9H0R5 595 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 ARRDC1-AS1Q9H2J1 176 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 AGO4Q9HCK5 861 aaKnown RBP5.29□□□□□ -1.56
SCFD1-223ENST00000557076 HEBP1Q9NRV9 189 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 MSRB2Q9Y3D2 182 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 NEUROG3Q9Y4Z2 214 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 KIAA1671Q9BY89 1806 aa5.29□□□□□ -1.56
SCFD1-223ENST00000557076 CELSR3Q9NYQ7 3312 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 BAZ2BQ9UIF8 2168 aaKnown RBP5.28□□□□□ -1.56
SCFD1-223ENST00000557076 CACNA1EQ15878 2313 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 CCDC163A0A0D9SF12 145 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 A0A0D9SFI3 127 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 K7ESF4 209 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 B4GALT3O60512 393 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 EPN2O95208 641 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 CCNE2O96020 404 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 POU2F2P09086 479 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 IMPDH2P12268 514 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 LIMS1P48059 325 aa5.28□□□□□ -1.56
SCFD1-223ENST00000557076 RAB27AP51159 221 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms