RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 DMRTA2Q96SC8 542 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 VRK1Q99986 396 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 REXO4Q9GZR2 422 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 TNMDQ9H2S6 317 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 HMG20BQ9P0W2 317 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 CFAP20Q9Y6A4 193 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 MAST3O60307 1309 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 SPATA31A6Q5VVP1 1343 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 DTNBO60941 627 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 ABLIM3O94929 683 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 SCGB1D2O95969 90 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 TUBB4AP04350 444 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CKBP12277 381 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 KCNJ4P48050 445 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 BLOC1S1P78537 153 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 TEFQ10587 303 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 OS9Q13438 667 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-246ENST00000557030 KRT32Q14532 448 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 RAB39AQ14964 217 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CYP2A13Q16696 494 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 KHDC1Q4VXA5 237 aaKnown RBP5.33□□□□□ -1.56
ATXN3-246ENST00000557030 MEX3CQ5U5Q3 659 aaKnown RBP5.33□□□□□ -1.56
ATXN3-246ENST00000557030 OLFML1Q6UWY5 402 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 PPP1R42Q7Z4L9 355 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 GPR149Q86SP6 731 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 TTC7BQ86TV6 843 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 PRIMA1Q86XR5 153 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CCDC83Q8IWF9 413 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CCDC112Q8NEF3 446 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 TBC1D15Q8TC07 691 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 DNAAF4Q8WXU2 420 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 MRGPRX4Q96LA9 322 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CDH19Q9H159 772 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 RNPEPQ9H4A4 650 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CLSTN2Q9H4D0 955 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 PRDM13Q9H4Q3 707 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CYP4F11Q9HBI6 524 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 IL1RAPL2Q9NP60 686 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 ECHDC1Q9NTX5 307 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 KCNE5Q9UJ90 142 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 PYCARDQ9ULZ3 195 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 CRYBG1Q9Y4K1 1723 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 ABCC6O95255 1503 aa5.33□□□□□ -1.56
ATXN3-246ENST00000557030 KDM6AO15550 1401 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 DCCP43146 1447 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 E2F8A0AVK6 867 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 PI4KAP2A4QPH2 592 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 ZFPL1O95159 310 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 FOSP01100 380 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 RPLP2P05387 115 aaKnown RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 IFIT2P09913 472 aaKnown RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 NBPF7P0C2Y1 421 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 HKR1P10072 659 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 TNNT1P13805 278 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 MPLP40238 635 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 CLK3P49761 638 aaKnown RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 ZNF75DP51815 510 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 NOMO3P69849 1222 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 CXADRP78310 365 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 HSD11B2P80365 405 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 CBX1P83916 185 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 DSC2Q02487 901 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 TLE1Q04724 770 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 NECTIN1Q15223 517 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 ANO6Q4KMQ2 910 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 NOMO2Q5JPE7 1267 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 C1orf141Q5JVX7 400 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 ATL3Q6DD88 541 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 BLOC1S2Q6QNY1 142 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 SARM1Q6SZW1 724 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 CWC27Q6UX04 472 aaKnown RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 CCDC186Q7Z3E2 898 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 ZNF575Q86XF7 245 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 PLA2G4DQ86XP0 818 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 FITM2Q8N6M3 262 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 PI4KAP1Q8N8J0 262 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 SPC24Q8NBT2 197 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 NSUN6Q8TEA1 469 aaKnown RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 PACSIN1Q9BY11 444 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 RHOBTB2Q9BYZ6 727 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 TRIM5Q9C035 493 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 ZSCAN16Q9H4T2 348 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-246ENST00000557030 HSFX1Q9UBD0 423 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 PCSK5Q92824 1860 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 MEGF6O75095 1541 aa5.32□□□□□ -1.56
ATXN3-246ENST00000557030 COL11A2P13942 1736 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 RFX7Q2KHR2 1363 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 UTYO14607 1347 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 MYADML2A6NDP7 307 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 GOLGA6L19H0YKK7 550 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 HAUS5O94927 633 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 FTLP02792 175 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 POU2F2P09086 479 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 MTHFD1P11586 935 aaKnown RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 PHKG2P15735 406 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ATF3P18847 181 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 USP14P54578 494 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 GSDMDP57764 484 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms