RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MAML2Q8IZL2 1156 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 TTC16Q8NEE8 873 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 TTC8Q8TAM2 541 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SECISBP2LQ93073 1101 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 MYLPFQ96A32 169 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 RSPRY1Q96DX4 576 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 PAGE5Q96GU1 130 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 ZFYVE19Q96K21 471 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CEP295NLQ96MC4 621 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SLC46A2Q9BY10 475 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 FAM126AQ9BYI3 521 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SCAND2PQ9GZW5 306 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SMG9Q9H0W8 520 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CHRDQ9H2X0 955 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 TRPC7Q9HCX4 862 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 GKN1Q9NS71 199 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 ZSCAN32Q9NX65 697 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 RAB23Q9ULC3 237 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 FRMD4BQ9Y2L6 1034 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 NCANO14594 1321 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 ATP8B3O60423 1300 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 ARNTLO00327 626 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 PDXKO00764 312 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 KLRC4O43908 158 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 ATP2C2O75185 946 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 STAU1O95793 577 aaKnown RBP8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 RPN1P04843 607 aaKnown RBP8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 CKMP06732 381 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 CHRNB1P11230 501 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 P4HA1P13674 534 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 LORP23490 312 aaPredicted RBP8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 BDNFP23560 247 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 LMO2P25791 158 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 SOX9P48436 509 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 MYL6P60660 151 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 MTAPQ13126 283 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 FZD5Q13467 585 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 RUNX3Q13761 415 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 KCNB1Q14721 858 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 PDGFRLQ15198 375 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 ZNF699Q32M78 642 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 ZNF667Q5HYK9 610 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 MDH1BQ5I0G3 518 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 SCARA3Q6AZY7 606 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 FAM171BQ6P995 826 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 LIMS2Q7Z4I7 341 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 STKLD1Q8NE28 680 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 MYCBPAPQ8TBZ2 947 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 KBTBD7Q8WVZ9 684 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 RUBCNQ92622 972 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 USP13Q92995 863 aaPredicted RBP8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 SPATA17Q96L03 361 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 MYRFLQ96LU7 910 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 PKMYT1Q99640 499 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 GTSE1Q9NYZ3 720 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 TRPM5Q9NZQ8 1165 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 NCDNQ9UBB6 729 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 HPSEQ9Y251 543 aa8.2□□□□□ -1.1
HNRNPC-226ENST00000556628 GREB1Q4ZG55 1949 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 GOLGA6L4A6NEF3 574 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 SHISA7A6NL88 538 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 LRRIQ3A6PVS8 624 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 HCRTO43612 131 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 NR3C1P04150 777 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 KRT13P13646 458 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 PFKLP17858 780 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 PTPN1P18031 435 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 PPP3CCP48454 512 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 IFNAR2P48551 515 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 CASP4P49662 377 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 NDUFA8P51970 172 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 FAM160A1Q05DH4 1040 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 TNK2Q07912 1038 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 GRSF1Q12849 480 aaKnown RBP eCLIP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 STK4Q13043 487 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 NR1H3Q13133 447 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 ZNF268Q14587 947 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 PON2Q15165 354 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 LINC01559Q495D7 138 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 CEP135Q66GS9 1140 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 TSSK4Q6SA08 328 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 DENND5BQ6ZUT9 1274 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 TMEM150AQ86TG1 271 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 SLC9A9Q8IVB4 645 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 SYNPOQ8N3V7 929 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 SPEM1Q8N4L4 309 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 CPA6Q8N4T0 437 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 GPR161Q8N6U8 529 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 ZBTB44Q8NCP5 570 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 KIAA0895Q8NCT3 520 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 PARD3BQ8TEW8 1205 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 BAP1Q92560 729 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 PCED1BQ96HM7 432 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 TNIP3Q96KP6 325 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 LRRC3BQ96PB8 259 aa8.19□□□□□ -1.1
HNRNPC-226ENST00000556628 MRPL45Q9BRJ2 306 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms