RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 TAF12Q16514 161 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 NFE2Q16621 373 aaPredicted RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 DDR2Q16832 855 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 ZNF699Q32M78 642 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 SYT10Q6XYQ8 523 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 GAREM2Q75VX8 874 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 ITIH5Q86UX2 942 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 FAM186BQ8IYM0 893 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 RNF10Q8N5U6 811 aaKnown RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 LEMD2Q8NC56 503 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 NEK11Q8NG66 645 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 ZSCAN18Q8TBC5 510 aaPredicted RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 TAF4BQ92750 862 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 PKMYT1Q99640 499 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 MRPL45Q9BRJ2 306 aaKnown RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 XYLT2Q9H1B5 865 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 SNX25Q9H3E2 840 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 ATXN3LQ9H3M9 355 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 MMRN2Q9H8L6 949 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.642e-7■■■■■ 31.7
HNRNPC-225ENST00000556513 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 ASB3Q9Y575 518 aa11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 HELZP42694 1942 aaKnown RBP11.02□□□□□ -0.64
HNRNPC-225ENST00000556513 MICAL2O94851 1124 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CCDC172P0C7W6 258 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 TRIM49P0CI25 452 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 TRIM49CP0CI26 452 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 EPB41P11171 864 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 KRT13P13646 458 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 PRLRP16471 622 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 NPR3P17342 541 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 WARSP23381 471 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 GNL1P36915 607 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 VIPR2P41587 438 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 RAP1GAPP47736 663 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CDH8P55286 799 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CYP4F8P98187 520 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CYP27A1Q02318 531 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 GRM2Q14416 872 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CCDC40Q4G0X9 1142 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 C1orf220Q5T0J3 134 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 RAD9BQ6WBX8 426 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 SV2AQ7L0J3 742 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CEP112Q8N8E3 955 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 TMEM105Q8N8V8 129 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CPLX3Q8WVH0 158 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 FAXDC2Q96IV6 333 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CCDC42Q96M95 316 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ASB16Q96NS5 453 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 DPEP3Q9H4B8 488 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ZFP14Q9HCL3 533 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CRTAC1Q9NQ79 661 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 SLC2A4RGQ9NR83 387 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 AIPL1Q9NZN9 384 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 WNT16Q9UBV4 365 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CDH9Q9ULB4 789 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 MYO16Q9Y6X6 1858 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 COL4A2P08572 1712 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 F5P12259 2224 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CTAGE9A4FU28 777 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 A8MXQ7 604 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 PES1O00541 588 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 PI15O43692 258 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ECI2O75521 394 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 GCLMP48507 274 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 SGSM1Q2NKQ1 1148 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ZNF667Q5HYK9 610 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 MDH1BQ5I0G3 518 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 GPR158Q5T848 1215 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 CWF19L1Q69YN2 538 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ASTLQ6HA08 431 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 SPOPLQ6IQ16 392 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 FAM171BQ6P995 826 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 WDR59Q6PJI9 974 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 VITQ6UXI7 678 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 TOGARAM2Q6ZUX3 1019 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 SCN4BQ8IWT1 228 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ZNF592Q92610 1267 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 SMARCD2Q92925 531 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 MYLPFQ96A32 169 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ELSPBP1Q96BH3 223 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ABCB6Q9NP58 842 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 ARHGEF3Q9NR81 526 aa11.01□□□□□ -0.65
HNRNPC-225ENST00000556513 NCANO14594 1321 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 CACNA1IQ9P0X4 2223 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 SOWAHDA6NJG2 315 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 PJA2O43164 708 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 FGF19O95750 216 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 ASS1P00966 412 aaKnown RBP11□□□□□ -0.65
HNRNPC-225ENST00000556513 HLA-DRAP01903 254 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 AFPP02771 609 aaKnown RBP11□□□□□ -0.65
HNRNPC-225ENST00000556513 SERPING1P05155 500 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 BDNFP23560 247 aa11□□□□□ -0.65
HNRNPC-225ENST00000556513 PIK3CAP42336 1068 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms