RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SMOQ99835 787 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 CLSTN3Q9BQT9 956 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 NUP85Q9BW27 656 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 PACSIN1Q9BY11 444 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 CYP4F11Q9HBI6 524 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 ASNSD1Q9NWL6 643 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
ACTN1-218ENST00000556343 IP6K2Q9UHH9 426 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 YBX2Q9Y2T7 364 aaKnown RBP9.7□□□□□ -0.86
ACTN1-218ENST00000556343 NCANO14594 1321 aa9.7□□□□□ -0.86
ACTN1-218ENST00000556343 WDR27A2RRH5 827 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 E5RJQ4 531 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 F8VP50 259 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 GOLGA8SH3BPF8 625 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 CAPN9O14815 690 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 TEX28O15482 410 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 MTA2O94776 668 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 GLUD1P00367 558 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 CNPP09543 421 aaKnown RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 CSH1P0DML2 217 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 CSH2P0DML3 217 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 RPL17P18621 184 aaKnown RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 SLC1A1P43005 524 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 EPHB3P54753 998 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 HADHBP55084 474 aaKnown RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 GNG11P61952 73 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 PTP4A2Q12974 167 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 DUSP4Q13115 394 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 MAMLD1Q13495 774 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 ZNF569Q5MCW4 686 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 DNTTIP2Q5QJE6 756 aaKnown RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 FAM102AQ5T9C2 384 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 FAM109BQ6ICB4 259 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 DENND5BQ6ZUT9 1274 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 XYLT1Q86Y38 959 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 TCEAL8Q8IYN2 117 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 ATAD1Q8NBU5 361 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 OLIG1Q8TAK6 271 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 HDAC7Q8WUI4 952 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 ARNTL2Q8WYA1 636 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 KLHL5Q96PQ7 755 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 KCNK16Q96T55 309 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 LACRTQ9GZZ8 138 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 RRN3Q9NYV6 651 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 UXTQ9UBK9 157 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-218ENST00000556343 CYTH4Q9UIA0 394 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 SLC27A5Q9Y2P5 690 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 PAXBP1Q9Y5B6 917 aa9.69□□□□□ -0.86
ACTN1-218ENST00000556343 RCCD1A6NED2 376 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 C2orf71A6NGG8 1288 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 FSCN2O14926 492 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 GRM6O15303 877 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 BUB1O43683 1085 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 HSF2BPO75031 334 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 RNF8O76064 485 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 MOCS3O95396 460 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ZBED1O96006 694 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 LRG1P02750 347 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ERBB2P04626 1255 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 CASQ1P31415 396 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 PBX2P40425 430 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 PPP3CCP48454 512 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 PSEN1P49768 467 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 RNASE9P60153 205 aaKnown RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ERVFC1P60507 584 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 MRPS5P82675 430 aaKnown RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ADIGQ0VDE8 80 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 PIGHQ14442 188 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ACAP1Q15027 740 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 DDR2Q16832 855 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 RAB41Q5JT25 222 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 RSPO2Q6UXX9 243 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 FAM183BPQ6ZVS7 135 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ARCQ7LC44 396 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 DAAM2Q86T65 1068 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 MON1AQ86VX9 555 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 PDZD8Q8NEN9 1154 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ZMIZ2Q8NF64 920 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 AUTS2Q8WXX7 1259 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 FAM149B1Q96BN6 582 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ARHGEF26Q96DR7 871 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ZNF512Q96ME7 567 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 CDK5RAP1Q96SZ6 601 aaKnown RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 CDCA3Q99618 268 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 PLEKHA4Q9H4M7 779 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 TLE6Q9H808 572 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.68□□□□□ -0.86
ACTN1-218ENST00000556343 ANAPC7Q9UJX3 599 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 AMFRQ9UKV5 643 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 STAP1Q9ULZ2 295 aa9.68□□□□□ -0.86
ACTN1-218ENST00000556343 TMEM265A0A087WTH1 108 aa9.67□□□□□ -0.86
ACTN1-218ENST00000556343 CTAGE9A4FU28 777 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms