RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 UPK3BL1B0FP48 263 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 PATE3B3GLJ2 98 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 UPK3BL2E5RIL1 263 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 I3L4J1 428 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 SYN3O14994 580 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 TBX3O15119 743 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 GBP1P32455 592 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 LMAN2Q12907 356 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 PTPAQ15257 358 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 CPSF6Q16630 551 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 FAM187BQ17R55 369 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 ITPRIPL2Q3MIP1 535 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 SGO2Q562F6 1265 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 PMS2CLQ68D20 193 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 FSTL4Q6MZW2 842 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 C11orf74Q86VG3 221 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 HNRNPLLQ8WVV9 542 aaKnown RBP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 FAM20AQ96MK3 541 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 TCEANC2Q96MN5 208 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 PPP1R10Q96QC0 940 aaKnown RBP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 LXNQ9BS40 222 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 FZD8Q9H461 694 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 ZSWIM4Q9H7M6 989 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 GOLGA2P5Q9HBQ8 144 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 PRMT7Q9NVM4 692 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 VPS54Q9P1Q0 977 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 DDX25Q9UHL0 483 aaKnown RBP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 EVLQ9UI08 416 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-236ENST00000556220 FBXL5Q9UKA1 691 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 TPCN1Q9ULQ1 816 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 UNC79Q9P2D8 2635 aa7.51□□□□□ -1.21
ATXN3-236ENST00000556220 TDRD15B5MCY1 1934 aaKnown RBP7.5□□□□□ -1.21
ATXN3-236ENST00000556220 ATG2BQ96BY7 2078 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 COL4A2P08572 1712 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 CCDC194A0A1B0GVG4 234 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 CYSRT1A8MQ03 144 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 N4BP3O15049 544 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 SLITRK3O94933 977 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 APBB3O95704 486 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 EGFP01133 1207 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 PRKCBP05771 671 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 DRD1P21728 446 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 DGKEP52429 567 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 NLRP5P59047 1200 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 AKAP17AQ02040 695 aaKnown RBP7.5□□□□□ -1.21
ATXN3-236ENST00000556220 SEMA3BQ13214 749 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 CTTNQ14247 550 aaKnown RBP7.5□□□□□ -1.21
ATXN3-236ENST00000556220 CTXN3Q4LDR2 81 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
ATXN3-236ENST00000556220 STXBP5Q5T5C0 1151 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 LCE3BQ5TA77 95 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 SYT13Q7L8C5 426 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 TMC8Q8IU68 726 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 NOSTRINQ8IVI9 506 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 C3orf58Q8NDZ4 430 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 BPIFB1Q8TDL5 484 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 DYDC2Q96IM9 177 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 LRIG1Q96JA1 1093 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 PDZD7Q9H5P4 517 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 CCDC86Q9H6F5 360 aaKnown RBP7.5□□□□□ -1.21
ATXN3-236ENST00000556220 KCNMB3Q9NPA1 279 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 SH3GLB2Q9NR46 395 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 LATS2Q9NRM7 1088 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 THG1LQ9NWX6 298 aaKnown RBP7.5□□□□□ -1.21
ATXN3-236ENST00000556220 GDAQ9Y2T3 454 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 VWA8A3KMH1 1905 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 TICRRQ7Z2Z1 1910 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 KNTC1P50748 2209 aa7.5□□□□□ -1.21
ATXN3-236ENST00000556220 SMIM28A0A1B0GU29 152 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 SLC37A4O43826 429 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 DLGAP3O95886 979 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 ABL1P00519 1130 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 TXKP42681 527 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 GALK1P51570 392 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 EPHB3P54753 998 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 FAM193AP78312 1265 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 AMPD2Q01433 879 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 GSTM4Q03013 218 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 DMC1Q14565 340 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 FBXO43Q4G163 708 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 TRIM61Q5EBN2 209 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 GLRA4Q5JXX5 417 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 CDCA2Q69YH5 1023 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-236ENST00000556220 CCNI2Q6ZMN8 369 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-236ENST00000556220 GAREM2Q75VX8 874 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 TPH2Q8IWU9 490 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 PIGKQ92643 395 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 CHFRQ96EP1 664 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 ADPGKQ9BRR6 497 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 NUSAP1Q9BXS6 441 aaKnown RBP7.49□□□□□ -1.21
ATXN3-236ENST00000556220 POLR3FQ9H1D9 316 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-236ENST00000556220 DNAJC25Q9H1X3 360 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 FBRSL1Q9HCM7 1045 aaKnown RBP7.49□□□□□ -1.21
ATXN3-236ENST00000556220 GKN1Q9NS71 199 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 ANKEF1Q9NU02 776 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 NAP1L2Q9ULW6 460 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms