RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	UNG	P13051	313 aa	Predicted RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	RGS7	P49802	495 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ALDH18A1	P54886	795 aa	Known RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	TREML2	Q5T2D2	321 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	CYP4X1	Q8N118	509 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	FEZF2	Q8TBJ5	459 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	C2orf40	Q9H1Z8	148 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	TRABD	Q9H4I3	376 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029		O00370	1275 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	LPXN	O60711	386 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	GRAP2	O75791	330 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	NCALD	P61601	193 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	PSMC1	P62191	440 aa	Known RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	SLC39A4	Q6P5W5	647 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	VSIG10L	Q86VR7	867 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	RASSF3	Q86WH2	238 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	RDM1	Q8NG50	284 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	EXD1	Q8NHP7	514 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	GRAMD1A	Q96CP6	724 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	CENPK	Q9BS16	269 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	MAP3K20	Q9NYL2	800 aa	Known RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	L3MBTL1	Q9Y468	752 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	SNX9	Q9Y5X1	595 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	TBC1D12	O60347	775 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	KRT38	O76015	456 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	MAP3K6	O95382	1288 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	PGM1	P36871	562 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	NUMB	P49757	651 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ALDH5A1	P51649	535 aa	Predicted RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	EFNA5	P52803	228 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	GSC	P56915	257 aa	Predicted RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	NR1H3	Q13133	447 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	MORF4L2	Q15014	288 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	KIZ	Q2M2Z5	673 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	RCOR2	Q8IZ40	523 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ABRA	Q8N0Z2	381 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	SIX6OS1	Q8N1H7	587 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ACSF2	Q96CM8	615 aa	Predicted RBP	12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	STAMBPL1	Q96FJ0	436 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	WNK4	Q96J92	1243 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	TTC25	Q96NG3	672 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	SIK2	Q9H0K1	926 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	RXFP1	Q9HBX9	757 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	UBR3	Q6ZT12	1888 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ATP9B	O43861	1147 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ADORA2B	P29275	332 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	TYK2	P29597	1187 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	DNAJC3	Q13217	504 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	MAMLD1	Q13495	774 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	SURF1	Q15526	300 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ATF7IP2	Q5U623	682 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	ICA1L	Q8NDH6	482 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	HERPUD2	Q9BSE4	406 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	MTMR12	Q9C0I1	747 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	CYP39A1	Q9NYL5	469 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	MCM8	Q9UJA3	840 aa		12.8	□□□□□ -0.36
TMPO-212	ENST00000556029	PDGFRB	P09619	1106 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	TBXAS1	P24557	533 aa	Predicted RBP	12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	CCDC85B	Q15834	202 aa	Predicted RBP	12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	ATP13A4	Q4VNC1	1196 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	XRRA1	Q6P2D8	792 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	KATNAL2	Q8IYT4	538 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	SAMD3	Q8N6K7	520 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	MAGEC3	Q8TD91	643 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	INPP5D	Q92835	1189 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	NCLN	Q969V3	563 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	FAM193B	Q96PV7	902 aa	Predicted RBP	12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	NDE1	Q9NXR1	346 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	ERAP1	Q9NZ08	941 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	SUFU	Q9UMX1	484 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	QSER1	Q2KHR3	1735 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	MYPN	Q86TC9	1320 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	GRIN3B	O60391	1043 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	CETP	P11597	493 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	ABCD1	P33897	745 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	PPP1R2P3	Q6NXS1	205 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	C16orf87	Q6PH81	154 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	DSTYK	Q6XUX3	929 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	SZRD1	Q7Z422	152 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	OR6P1	Q8NGX9	317 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	KLRG1	Q96E93	195 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	DACH2	Q96NX9	599 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	MCEE	Q96PE7	176 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	SERPINI1	Q99574	410 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	KLK14	Q9P0G3	267 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	THEG	Q9P2T0	379 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	CNTNAP1	P78357	1384 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	THSD7A	Q9UPZ6	1657 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	APRT	P07741	180 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	ZSCAN5DP	P0CG00	497 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	AMHR2	Q16671	573 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	TDRD10	Q5VZ19	366 aa	Known RBP	12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	RHBDF2	Q6PJF5	856 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	FAM228A	Q86W67	206 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	THTPA	Q9BU02	230 aa		12.79	□□□□□ -0.36
TMPO-212	ENST00000556029	FOXP3	Q9BZS1	431 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms