RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CTC1Q2NKJ3 1217 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ZACNQ401N2 412 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ATF7IP2Q5U623 682 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PAPD7Q5XG87 772 aaKnown RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 MPZL3Q6UWV2 235 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 CXCL17Q6UXB2 119 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 CRELD2Q6UXH1 353 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 BTLAQ7Z6A9 289 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 SRGAP1Q7Z6B7 1085 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PROSER1Q86XN7 944 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ARHGEF19Q8IW93 802 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 BRSK2Q8IWQ3 736 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 SLC30A5Q8TAD4 765 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 TAS1R2Q8TE23 839 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ZBTB45Q96K62 511 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 TGS1Q96RS0 853 aaKnown RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 AGPAT1Q99943 283 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 RSRP1Q9BUV0 290 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PHF7Q9BWX1 381 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PDE11AQ9HCR9 933 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 NEUROD4Q9HD90 331 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 SEPT11Q9NVA2 429 aaKnown RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 AJAP1Q9UKB5 411 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 TFR2Q9UP52 801 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 AKT3Q9Y243 479 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 TNFSF13BQ9Y275 285 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 KCNMB2Q9Y691 235 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 DUSP10Q9Y6W6 482 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 TRIP12Q14669 1992 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ABCA2Q9BZC7 2435 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ANK1P16157 1881 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 A0A087WZ62 844 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 A0A0A6YYK5 440 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CTAGE15A4D2H0 777 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 DDX3XO00571 662 aaKnown RBP eCLIP7.26□□□□□ -1.253e-31■■■■■ 27.5
SLIRP-204ENST00000555890 KPNA6O60684 536 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 LRRN2O75325 713 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CLSTN1O94985 981 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 IL18RAPO95256 599 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 HLA-DRAP01903 254 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TNNC2P02585 160 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CTAGE8P0CG41 777 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 MCF2P10911 925 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 EPB42P16452 691 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TCP1P17987 556 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TBXAS1P24557 533 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 NOP2P46087 812 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 POU5F1Q01860 360 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 GCNT1Q02742 428 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 MBTD1Q05BQ5 628 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 DLX2Q07687 328 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 NCBP1Q09161 790 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 FOXC1Q12948 553 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 GRIK4Q16099 956 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 FAM187BQ17R55 369 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TCTN1Q2MV58 587 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF568Q3ZCX4 644 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CWF19L1Q69YN2 538 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 C15orf39Q6ZRI6 1047 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TRAPPC11Q7Z392 1133 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 DEFB128Q7Z7B8 93 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TLK2Q86UE8 772 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CTAGE6Q86UF2 777 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF598Q86UK7 904 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF410Q86VK4 478 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 WDR49Q8IV35 697 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CTAGE4Q8IX94 777 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 FAM71AQ8IYT1 594 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 LINC01465Q8N7H1 131 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 KREMEN2Q8NCW0 462 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CTNNBL1Q8WYA6 563 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 SHC3Q92529 594 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 GOLGA1Q92805 767 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 SEMA4DQ92854 862 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 PMEPA1Q969W9 287 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 HSH2DQ96JZ2 352 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 SCLT1Q96NL6 688 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 FDXACB1Q9BRP7 624 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 SPON2Q9BUD6 331 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 IMPG2Q9BZV3 1241 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 GPR88Q9GZN0 384 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 HAPLN2Q9GZV7 340 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 SMOC2Q9H3U7 446 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 SUV39H2Q9H5I1 410 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 NSUN3Q9H649 340 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 ZFAND3Q9H8U3 227 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TOPORSQ9NS56 1045 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CPSF3Q9UKF6 684 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 WASF3Q9UPY6 502 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 TLN1Q9Y490 2541 aaKnown RBP7.26□□□□□ -1.25
SLIRP-204ENST00000555890 NRCAMQ92823 1304 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 CNTNAP2Q9UHC6 1331 aa7.26□□□□□ -1.25
SLIRP-204ENST00000555890 ATG2AQ2TAZ0 1938 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 SMIM35A0A1B0GVV1 85 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 FAM181BA6NEQ2 426 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 ENC1O14682 589 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 BUB1O43683 1085 aa7.25□□□□□ -1.25
SLIRP-204ENST00000555890 RTN2O75298 545 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms