RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 HOXC6P09630 235 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 NEFHP12036 1026 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 DESP17661 470 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TARSP26639 723 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 MARK3P27448 753 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SSTR1P30872 391 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 STIP1P31948 543 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 RPL22P35268 128 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 SLC8A3P57103 927 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 GPX6P59796 221 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 OSTNP61366 133 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TFDP2Q14188 446 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SLC1A5Q15758 541 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TAZQ16635 292 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SLC45A4Q5BKX6 768 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 FAM47CQ5HY64 1035 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 NOL9Q5SY16 702 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 FNBP1LQ5T0N5 605 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 DARS2Q6PI48 645 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 RIOX2Q8IUF8 465 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 FAM71DQ8N9W8 422 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SPATA18Q8TC71 538 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 HSPH1Q92598 858 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 KLRG1Q96E93 195 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ANKRD27Q96NW4 1050 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TMEM237Q96Q45 408 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ADPGKQ9BRR6 497 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 INO80BQ9C086 356 aaPredicted RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 XYLT2Q9H1B5 865 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 VPS11Q9H270 941 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 NPHS2Q9NP85 383 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SLCO1B3Q9NPD5 702 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 GPRC5DQ9NZD1 345 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SAE1Q9UBE0 346 aaPredicted RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 ZFP69BQ9UJL9 534 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 CHKBQ9Y259 395 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 L3MBTL1Q9Y468 752 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 AFG3L2Q9Y4W6 797 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 PPP2R3BQ9Y5P8 575 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 CLUHO75153 1309 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 E7ESA3 106 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 C2CD2LO14523 706 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 LUC7L3O95232 432 aaKnown RBP7.31□□□□□ -1.24
TDP1-213ENST00000555880 INHBAP08476 426 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 RBP3P10745 1247 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 EDNRBP24530 442 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 IL1R2P27930 398 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 RAP1GAPP47736 663 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 GDF10P55107 478 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 FSTL1Q12841 308 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 NAA25Q14CX7 972 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 EFTUD2Q15029 972 aaKnown RBP eCLIP7.31□□□□□ -1.242e-8■■■■■ 57.6
TDP1-213ENST00000555880 ACCSLQ4AC99 568 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 FAM102AQ5T9C2 384 aaPredicted RBP7.31□□□□□ -1.24
TDP1-213ENST00000555880 PRAMEF18Q5VWM3 479 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 ANKRD22Q5VYY1 191 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 ZNF449Q6P9G9 518 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 NLRP9Q7RTR0 991 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 OTOAQ7RTW8 1153 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 NCAPG2Q86XI2 1143 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 XYLT1Q86Y38 959 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 MAP7D3Q8IWC1 876 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 LRRC71Q8N4P6 559 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 JOSD2Q8TAC2 188 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 C10orf82Q8WW14 230 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 NLRP4Q96MN2 994 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 CPXM1Q96SM3 734 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 DHRS4Q9BTZ2 278 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 TUBB6Q9BUF5 446 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 BCO2Q9BYV7 579 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 FRMD8Q9BZ67 464 aaPredicted RBP7.31□□□□□ -1.24
TDP1-213ENST00000555880 IQCGQ9H095 443 aaKnown RBP7.31□□□□□ -1.24
TDP1-213ENST00000555880 SAR1AQ9NR31 198 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 PCSK1NQ9UHG2 260 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 HAO1Q9UJM8 370 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 GRID1Q9ULK0 1009 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 ZMYND8Q9ULU4 1186 aaPredicted RBP7.31□□□□□ -1.24
TDP1-213ENST00000555880 USP18Q9UMW8 372 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 POLIQ9UNA4 740 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 FZD1Q9UP38 647 aa7.31□□□□□ -1.24
TDP1-213ENST00000555880 LOC102724159A0A0B4J2E5 919 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 A8MUI8 341 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 E7ENQ6 273 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 M0QYV0 167 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PRPSAP2O60256 369 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LPXNO60711 386 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 DIAPH2O60879 1101 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TRUB2O95900 331 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 HMGCRP04035 888 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ERBB2P04626 1255 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CXCL8P10145 99 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PROZP22891 400 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ADRA1DP25100 572 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 MIPP30301 263 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ATICP31939 592 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PCK1P35558 622 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PHKA2P46019 1235 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms