RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 KRTAP10-2P60368 255 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 DGCR2P98153 550 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 MYO1EQ12965 1108 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 TUBB3Q13509 450 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 TP53BP2Q13625 1128 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 PMS2P11Q13670 270 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 ARHGEF7Q14155 803 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 SLC29A2Q14542 456 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 PREPLQ4J6C6 727 aaPredicted RBP4.04□□□□□ -1.76
SRP54-209ENST00000555746 FCRL6Q6DN72 434 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 TMEM108Q6UXF1 575 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 RNF44Q7L0R7 432 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 KRT28Q7Z3Y7 464 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 SPRED1Q7Z699 444 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 GPR149Q86SP6 731 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 ZNF280BQ86YH2 543 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 LNX2Q8N448 690 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 FANCBQ8NB91 859 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 ZNF384Q8TF68 577 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 KIAA1191Q96A73 305 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 POLR3GLQ9BT43 218 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 AMBRA1Q9C0C7 1298 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 NRDE2Q9H7Z3 1164 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 ARFGAP3Q9NP61 516 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 PLCB1Q9NQ66 1216 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 TRMT13Q9NUP7 481 aaKnown RBP4.04□□□□□ -1.76
SRP54-209ENST00000555746 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 ZNF212Q9UDV6 495 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 NDRG4Q9ULP0 352 aaKnown RBP4.04□□□□□ -1.76
SRP54-209ENST00000555746 FAM135AQ9P2D6 1515 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 MLH3Q9UHC1 1453 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 DISP2A7MBM2 1401 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 PLCH2O75038 1416 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 SETD5Q9C0A6 1442 aa4.04□□□□□ -1.76
SRP54-209ENST00000555746 NCANO14594 1321 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 TIAM1Q13009 1591 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 TRGV11A0A075B6L2 103 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 PIPSLA2A3N6 862 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 UNC119BA6NIH7 251 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 KCNQ3O43525 872 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 HARSP12081 509 aaKnown RBP4.03□□□□□ -1.76
SRP54-209ENST00000555746 MYL4P12829 197 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 KCNA3P22001 575 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 CD6P30203 668 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 CPT1AP50416 773 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 BLOC1S1P78537 153 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 E2F2Q14209 437 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 MPEG1Q2M385 716 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 SLC35G1Q2M3R5 365 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 LSM12Q3MHD2 195 aaKnown RBP4.03□□□□□ -1.76
SRP54-209ENST00000555746 ARL13BQ3SXY8 428 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 LY6G5CQ5SRR4 150 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 RBM20Q5T481 1227 aaKnown RBP4.03□□□□□ -1.76
SRP54-209ENST00000555746 ABHD17BQ5VST6 288 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 ICE2Q659A1 982 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 AFAP1Q8N556 730 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 CYP2W1Q8TAV3 490 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 BPIFB1Q8TDL5 484 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 FAM136AQ96C01 138 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 GPR20Q99678 358 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 SYT17Q9BSW7 474 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 WDR12Q9GZL7 423 aaKnown RBP4.03□□□□□ -1.76
SRP54-209ENST00000555746 FAM83DQ9H4H8 585 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 CXorf36Q9H7Y0 433 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 SLC2A4RGQ9NR83 387 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 TBCCD1Q9NVR7 557 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 HDAC9Q9UKV0 1011 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 SSX2IPQ9Y2D8 614 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 MYRFQ9Y2G1 1151 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 DAAM1Q9Y4D1 1078 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 CDY1Q9Y6F8 540 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 CUL9Q8IWT3 2517 aa4.03□□□□□ -1.76
SRP54-209ENST00000555746 UGGT1Q9NYU2 1555 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 RGPD1P0DJD0 1748 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 WDR90Q96KV7 1748 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 A0A087WZ62 844 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 AQP7P3A6NL99 342 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 H7C4K7 107 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 PRRG2O14669 202 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 RRP9O43818 475 aaKnown RBP4.02□□□□□ -1.77
SRP54-209ENST00000555746 PLA2G6O60733 806 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 CSF1RP07333 972 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 PPP3CBP16298 524 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 ABCB4P21439 1286 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 EEF1GP26641 437 aaKnown RBP4.02□□□□□ -1.77
SRP54-209ENST00000555746 PPM1AP35813 382 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 IL6STP40189 918 aaPredicted RBP4.02□□□□□ -1.77
SRP54-209ENST00000555746 HSPA7P48741 367 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 NXPH1P58417 271 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 KRT17Q04695 432 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 FSTL1Q12841 308 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 ZNF750Q32MQ0 723 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 C10orf62Q5T681 223 aaPredicted RBP4.02□□□□□ -1.77
SRP54-209ENST00000555746 ARHGAP40Q5TG30 622 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 VPS53Q5VIR6 699 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 PLAG1Q6DJT9 500 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 VWA1Q6PCB0 445 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 USP17L6PQ6QN14 398 aa4.02□□□□□ -1.77
SRP54-209ENST00000555746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms