RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 PEX11AO75192 247 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 TMEM63AO94886 807 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 ATP5BP06576 529 aaKnown RBP16.89■□□□□ 0.29
TUBB3-209ENST00000555609 INHBAP08476 426 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 VDRP11473 427 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 IBSPP21815 317 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-209ENST00000555609 CNTN2Q02246 1040 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 TNFAIP2Q03169 654 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 PTPN11Q06124 597 aaPredicted RBP16.89■□□□□ 0.29
TUBB3-209ENST00000555609 POU5F1BQ06416 359 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 CDK18Q07002 472 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 MAP7D3Q8IWC1 876 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 RTP4Q96DX8 246 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 WDR83Q9BRX9 315 aaKnown RBP16.89■□□□□ 0.29
TUBB3-209ENST00000555609 CNPY3Q9BT09 278 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 TSSK1BQ9BXA7 367 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 NPHS2Q9NP85 383 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 METTL5Q9NRN9 209 aaKnown RBP16.89■□□□□ 0.29
TUBB3-209ENST00000555609 CYTH4Q9UIA0 394 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 TEX264Q9Y6I9 313 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 GCKP35557 465 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 ETV4P43268 484 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 KCNJ11Q14654 390 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 PDK2Q15119 407 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SCARA3Q6AZY7 606 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 BZW1Q7L1Q6 419 aaKnown RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 FAM71DQ8N9W8 422 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SPATA18Q8TC71 538 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 LRRC39Q96DD0 335 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 TMEM176AQ96HP8 235 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 ZNF570Q96NI8 536 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 CPXM1Q96SM3 734 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 DCLRE1BQ9H816 532 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 ZNF487B1APH4 448 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 CILPO75339 1184 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 BANF1O75531 89 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 TOMM70O94826 608 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 ERBB2P04626 1255 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 FGFR1P11362 822 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 MAGEA6P43360 314 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 ARFIP2P53365 341 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 BASP1P80723 227 aaKnown RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 PTK7Q13308 1070 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 STILQ15468 1287 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SMTNL2Q2TAL5 461 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 KCNT1Q5JUK3 1230 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 TTC39BQ5VTQ0 682 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 DARS2Q6PI48 645 aaKnown RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SH2D5Q6ZV89 423 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 MTDHQ86UE4 582 aaKnown RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 MRRFQ96E11 262 aaKnown RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 NSL1Q96IY1 281 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 ADPGKQ9BRR6 497 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 MMADHCQ9H3L0 296 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 MKS1Q9NXB0 559 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SAE1Q9UBE0 346 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 NXF1Q9UBU9 619 aaKnown RBP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 SUFUQ9UMX1 484 aa16.88■□□□□ 0.29
TUBB3-209ENST00000555609 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.88■□□□□ 0.29
TUBB3-209ENST00000555609 HGSO14964 777 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-209ENST00000555609 MICAL2O94851 1124 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 HAUS5O94927 633 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 TPBGLP0DKB5 382 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 GPD1P21695 349 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 TGM2P21980 687 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 ELK3P41970 407 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 CDK16Q00536 496 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 EFTUD2Q15029 972 aaKnown RBP eCLIP16.87■□□□□ 0.291e-10■■■■■ 39.2
TUBB3-209ENST00000555609 PRKD1Q15139 912 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-209ENST00000555609 FAM187BQ17R55 369 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 SLC26A11Q86WA9 606 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 APLFQ8IW19 511 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-209ENST00000555609 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
TUBB3-209ENST00000555609 BTBD10Q9BSF8 475 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 ASB7Q9H672 318 aa16.87■□□□□ 0.29
TUBB3-209ENST00000555609 TCRBV7S3A2A0A539 114 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 TCRBV9S1A1TA0A576 114 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 STAU1O95793 577 aaKnown RBP16.86■□□□□ 0.29
TUBB3-209ENST00000555609 GPD2P43304 727 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 GAD2Q05329 585 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 FSTL1Q12841 308 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 BOLA3Q53S33 107 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 RAB3IL1Q8TBN0 382 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 AFG1LQ8WV93 481 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 TEKT4Q8WW24 435 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 NAF1Q96HR8 494 aaKnown RBP16.86■□□□□ 0.29
TUBB3-209ENST00000555609 NUDCD1Q96RS6 583 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 PRMT7Q9NVM4 692 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-209ENST00000555609 SIX4Q9UIU6 781 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 LTBP3Q9NS15 1303 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 BCLAF3A2AJT9 711 aaKnown RBP16.86■□□□□ 0.29
TUBB3-209ENST00000555609 ZBTB42B2RXF5 422 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 KRT37O76014 449 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 CBX6O95503 412 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 CD48P09326 243 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms