RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ARL14EPQ8N8R7 260 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-219ENST00000555563 PRSS33Q8NF86 280 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 KAT5Q92993 513 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 FBXO32Q969P5 355 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 JAKMIP2Q96AA8 810 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 TMEM176AQ96HP8 235 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 SHDQ96IW2 340 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 HEXIM2Q96MH2 286 aaKnown RBP14.53□□□□□ -0.08
SHMT2-219ENST00000555563 SLITRK1Q96PX8 696 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 CYP2S1Q96SQ9 504 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 PRRX2Q99811 253 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 DDX23Q9BUQ8 820 aaKnown RBP14.53□□□□□ -0.08
SHMT2-219ENST00000555563 DNAI2Q9GZS0 605 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 TRPV5Q9NQA5 729 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 TDP1Q9NUW8 608 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 TRPM5Q9NZQ8 1165 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 DACH1Q9UI36 760 aa14.53□□□□□ -0.08
SHMT2-219ENST00000555563 SHISA7A6NL88 538 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 HHLA1C9JL84 531 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 MBD3O95983 291 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 USP17L7P0C7H9 530 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 ERCC5P28715 1186 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-219ENST00000555563 PPP3CCP48454 512 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 YWHAEP62258 255 aaKnown RBP14.52□□□□□ -0.09
SHMT2-219ENST00000555563 USP4Q13107 963 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 TPD52L1Q16890 204 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-219ENST00000555563 ARHGAP29Q52LW3 1261 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 CREBRFQ8IUR6 639 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 ARHGEF19Q8IW93 802 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 PPM1KQ8N3J5 372 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 PJA1Q8NG27 643 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 INTS2Q9H0H0 1204 aaKnown RBP14.52□□□□□ -0.09
SHMT2-219ENST00000555563 IL37Q9NZH6 218 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 GMIPQ9P107 970 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 MYH10P35580 1976 aa14.52□□□□□ -0.09
SHMT2-219ENST00000555563 MIA3Q5JRA6 1907 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 KANSL1LA0AUZ9 987 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 FAM92AA1XBS5 289 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 OLFM2O95897 454 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 ABL1P00519 1130 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 OAS1P00973 400 aaKnown RBP14.51□□□□□ -0.09
SHMT2-219ENST00000555563 PFKLP17858 780 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 CD72P21854 359 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 PTPN5P54829 565 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 TNK2Q07912 1038 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 UBXN2BQ14CS0 331 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 ZNF77Q15935 545 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 ARHGAP17Q68EM7 881 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 CCDC105Q8IYK2 499 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 TTC16Q8NEE8 873 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 PDZD8Q8NEN9 1154 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 OVCA2Q8WZ82 227 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 PHOX2BQ99453 314 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 DUSP16Q9BY84 665 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 THAP9Q9H5L6 903 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 PNPLA8Q9NP80 782 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 LTB4R2Q9NPC1 389 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 THG1LQ9NWX6 298 aaKnown RBP14.51□□□□□ -0.09
SHMT2-219ENST00000555563 GTSE1Q9NYZ3 720 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 ARHGAP26Q9UNA1 814 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 PIAS3Q9Y6X2 628 aa14.51□□□□□ -0.09
SHMT2-219ENST00000555563 DCNP07585 359 aaKnown RBP14.5□□□□□ -0.09
SHMT2-219ENST00000555563 HDCP19113 662 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 ACO1P21399 889 aaKnown RBP14.5□□□□□ -0.09
SHMT2-219ENST00000555563 TARSP26639 723 aaKnown RBP14.5□□□□□ -0.09
SHMT2-219ENST00000555563 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
SHMT2-219ENST00000555563 SOX9P48436 509 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 PDE6CP51160 858 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 PLCB2Q00722 1185 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 GCNT1Q02742 428 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 MTF1Q14872 753 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 GOLGA7BQ2TAP0 167 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 HSP90AA4PQ58FG1 418 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 RRAGAQ7L523 313 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 EHBP1Q8NDI1 1231 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 CSGALNACT1Q8TDX6 532 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 SH3RF2Q8TEC5 729 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 COMMD8Q9NX08 183 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 SIT1Q9Y3P8 196 aa14.5□□□□□ -0.09
SHMT2-219ENST00000555563 MTF2Q9Y483 593 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-219ENST00000555563 CYP26A1O43174 497 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-219ENST00000555563 ZDHHC11BP0C7U3 371 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 GLULP15104 373 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 CD19P15391 556 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 PGFP49763 221 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 KPNA1P52294 538 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-219ENST00000555563 NUBP1P53384 320 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 ZXDBP98169 803 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 TCF15Q12870 199 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 SGO2Q562F6 1265 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 CCDC183Q5T5S1 534 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 TRIM68Q6AZZ1 485 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 TRIM65Q6PJ69 517 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 TMEM270Q6UE05 265 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 ZNF852Q6ZMS4 543 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 TTC30AQ86WT1 665 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 FAM114A1Q8IWE2 563 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 TTC8Q8TAM2 541 aa14.49□□□□□ -0.09
SHMT2-219ENST00000555563 KREMEN1Q96MU8 473 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms