RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 VIPR2P41587 438 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 GRK6P43250 576 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 BIRC3Q13489 604 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 IQCB1Q15051 598 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 TMEM95Q3KNT9 176 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 PLA1AQ53H76 456 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 TAPT1Q6NXT6 567 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 LAYNQ6UX15 382 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 ZDHHC24Q6UX98 284 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 NKAPQ8N5F7 415 aaKnown RBP6.34□□□□□ -1.39
VRK1-205ENST00000555402 SMCR8Q8TEV9 937 aaPredicted RBP6.34□□□□□ -1.39
VRK1-205ENST00000555402 SLC46A1Q96NT5 459 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 STK33Q9BYT3 514 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 MYLK2Q9H1R3 596 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 LUZP4Q9P127 313 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 HESX1Q9UBX0 185 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 ATP11BQ9Y2G3 1177 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 RAD54BQ9Y620 910 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 AATKQ6ZMQ8 1374 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 LOC102723971A0A1B0GUV8 181 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 FAM234BA2RU67 622 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 GOLGA6L3A6NEY3 463 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 CLCA1A8K7I4 914 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 ZFPL1O95159 310 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 NDST3O95803 873 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 CSTBP04080 98 aaKnown RBP6.33□□□□□ -1.4
VRK1-205ENST00000555402 IDEP14735 1019 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 ACVR2AP27037 513 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 WNT3P56703 355 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 KRT17Q04695 432 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 FOXR2Q6PJQ5 311 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.33□□□□□ -1.4
VRK1-205ENST00000555402 PPP1R32Q7Z5V6 425 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 RHOT2Q8IXI1 618 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 ATG16L2Q8NAA4 619 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 C18orf8Q96DM3 657 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
VRK1-205ENST00000555402 KLK15Q9H2R5 256 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 RNPEPQ9H4A4 650 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 HEYLQ9NQ87 328 aaPredicted RBP6.33□□□□□ -1.4
VRK1-205ENST00000555402 LRFN1Q9P244 771 aa6.33□□□□□ -1.4
VRK1-205ENST00000555402 CCDC195A0A1B0GUA6 201 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 H7C4K7 107 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 TOR1BO14657 336 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 ERN1O75460 977 aaKnown RBP6.32□□□□□ -1.4
VRK1-205ENST00000555402 ATXN1LP0C7T5 689 aaKnown RBP6.32□□□□□ -1.4
VRK1-205ENST00000555402 TPH1P17752 444 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
VRK1-205ENST00000555402 PFKFB4Q16877 469 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 INSCQ1MX18 579 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 MGAT5BQ3V5L5 792 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 SPDYE7PQ495Y7 208 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 TLDC1Q6P9B6 456 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 TMEM132CQ8N3T6 1108 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 VGLL2Q8N8G2 317 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 PSD4Q8NDX1 1056 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 OR56A1Q8NGH5 318 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 PDLIM2Q96JY6 352 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 ALOXE3Q9BYJ1 711 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.32□□□□□ -1.4
VRK1-205ENST00000555402 AGO4Q9HCK5 861 aaKnown RBP6.32□□□□□ -1.4
VRK1-205ENST00000555402 TM7SF3Q9NS93 570 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 ETAA1Q9NY74 926 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 SHOC2Q9UQ13 582 aa6.32□□□□□ -1.4
VRK1-205ENST00000555402 GPANK1O95872 356 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 A1BGP04217 495 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 ELANEP08246 267 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 PDIA3P30101 505 aaKnown RBP6.31□□□□□ -1.4
VRK1-205ENST00000555402 CPT1AP50416 773 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 RENBPP51606 427 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 ITGA8P53708 1063 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 HSD11B2P80365 405 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 TCF15Q12870 199 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 BOP1Q14137 746 aaKnown RBP6.31□□□□□ -1.4
VRK1-205ENST00000555402 ARHGEF7Q14155 803 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 ZACNQ401N2 412 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 TAF2Q6P1X5 1199 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 FUBP1Q96AE4 644 aaKnown RBP6.31□□□□□ -1.4
VRK1-205ENST00000555402 EVI5LQ96CN4 794 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 SNX27Q96L92 541 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 ZSWIM1Q9BR11 485 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 MESP1Q9BRJ9 268 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 OBP2BQ9NPH6 170 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 LRIT1Q9P2V4 623 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.31□□□□□ -1.4
VRK1-205ENST00000555402 MTO1Q9Y2Z2 717 aaKnown RBP6.31□□□□□ -1.4
VRK1-205ENST00000555402 PCDHGB3Q9Y5G1 929 aa6.31□□□□□ -1.4
VRK1-205ENST00000555402 A0A1B0GTW7 788 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 LGALS16A8MUM7 142 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 RASAL1O95294 804 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 FGAP02671 866 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 GCLCP48506 637 aaPredicted RBP6.3□□□□□ -1.4
VRK1-205ENST00000555402 CCT5P48643 541 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 PTDSS1P48651 473 aaKnown RBP6.3□□□□□ -1.4
VRK1-205ENST00000555402 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms