RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 NUP85Q9BW27 656 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 HEMGNQ9BXL5 484 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 ROPN1BQ9BZX4 212 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-211ENST00000555082 RNF208Q9H0X6 261 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 ROPN1Q9HAT0 212 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-211ENST00000555082 ST3GAL5Q9UNP4 418 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 A6NHS1 94 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 MIF4GDA9UHW6 222 aaKnown RBP10.41□□□□□ -0.74
PRKCH-211ENST00000555082 B4GALT4O60513 344 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 SMIM24O75264 130 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 TMEM191BP0C7N4 346 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 GBP1P32455 592 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 ADCY8P40145 1251 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 WDR4P57081 412 aaKnown RBP10.41□□□□□ -0.74
PRKCH-211ENST00000555082 C1QTNF8P60827 252 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
PRKCH-211ENST00000555082 USP37Q86T82 979 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 FAM13CQ8NE31 585 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 ZMAT2Q96NC0 199 aaKnown RBP10.41□□□□□ -0.74
PRKCH-211ENST00000555082 HERPUD2Q9BSE4 406 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 NINJ2Q9NZG7 142 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 CACNG4Q9UBN1 327 aa10.41□□□□□ -0.74
PRKCH-211ENST00000555082 TTC4O95801 387 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 CD52P31358 61 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 GTF2H1P32780 548 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ATN1P54259 1190 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 NOP14P78316 857 aaKnown RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 C2CD6Q53TS8 623 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 UBXN11Q5T124 520 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 TWF2Q6IBS0 349 aaKnown RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 SLC47A2Q86VL8 602 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 C1orf127Q8N9H9 656 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ARRDC4Q8NCT1 418 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ZNF564Q8TBZ8 553 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ACAP3Q96P50 834 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 SH3GL3Q99963 347 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 RNPEPL1Q9HAU8 725 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 STARD7Q9NQZ5 370 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 SIX4Q9UIU6 781 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 POLIQ9UNA4 740 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 CHKBQ9Y259 395 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 O00370 1275 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 PPEF2O14830 753 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 KRT5P13647 590 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 GNAZP19086 355 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 GJC1P36383 396 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ERFP50548 548 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 DUOXA2Q1HG44 320 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ZNF618Q5T7W0 954 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 NOTUMQ6P988 496 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 SLC27A1Q6PCB7 646 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 WDR49Q8IV35 697 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 LPPQ93052 612 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 C18orf25Q96B23 403 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ZNF653Q96CK0 615 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 RAB3IPQ96QF0 476 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 SENP6Q9GZR1 1112 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 ANAPC5Q9UJX4 755 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 R3HDM2Q9Y2K5 976 aaKnown RBP10.4□□□□□ -0.74
PRKCH-211ENST00000555082 TRPV2Q9Y5S1 764 aa10.4□□□□□ -0.74
PRKCH-211ENST00000555082 RASA4BC9J798 803 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 POC1B-GALNT4F8VUJ3 575 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 M0QZ92 97 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 RASA4O43374 803 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 RECQL4O94761 1208 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 ITGB3P05106 788 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 WEE2P0C1S8 567 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 CCNB1P14635 433 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 CD58P19256 250 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 CALB2P22676 271 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 IGFBP6P24592 240 aaPredicted RBP10.4□□□□□ -0.75
PRKCH-211ENST00000555082 RAP1GAPP47736 663 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 ORC1Q13415 861 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 SETDB1Q15047 1291 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 ARHGEF6Q15052 776 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 ZNF394Q53GI3 561 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 C11orf63Q6NUN7 778 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 LLGL2Q6P1M3 1020 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.75
PRKCH-211ENST00000555082 C4orf33Q8N1A6 199 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 DNAJC5GQ8N7S2 189 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 KIF12Q96FN5 646 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 MAGEB18Q96M61 343 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 RPS6KC1Q96S38 1066 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 TBC1D10AQ9BXI6 508 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 C1orf112Q9NSG2 853 aa10.4□□□□□ -0.75
PRKCH-211ENST00000555082 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.4□□□□□ -0.75
PRKCH-211ENST00000555082 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 PMM2O15305 246 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 PIAS1O75925 651 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 LUC7L3O95232 432 aaKnown RBP10.39□□□□□ -0.75
PRKCH-211ENST00000555082 TPBGLP0DKB5 382 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 CCL5P13501 91 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 RNF43Q68DV7 783 aa10.39□□□□□ -0.75
PRKCH-211ENST00000555082 TMEM154Q6P9G4 183 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms