RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 PDE4CQ08493 712 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 PAQR9Q6ZVX9 377 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TMC8Q8IU68 726 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 ARHGAP18Q8N392 663 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 SHKBP1Q8TBC3 707 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 NAP1L5Q96NT1 182 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TASP1Q9H6P5 420 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 CSNK1G1Q9HCP0 422 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TLR8Q9NR97 1041 aaKnown RBP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 IGSF9Q9P2J2 1179 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 RAPGEFL1Q9UHV5 662 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
ACTN1-214ENST00000555075 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
ACTN1-214ENST00000555075 MTCL1Q9Y4B5 1905 aaKnown RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 LOC730098B7Z3J9 87 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 F8VZ95 297 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 RALAP11233 206 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 LCP1P13796 627 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 HMGA1P17096 107 aaKnown RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 SOX5P35711 763 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 ACADSBP45954 432 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 RGS7P49802 495 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 ZNF132P52740 706 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 PRSS36Q5K4E3 855 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 TAF3Q5VWG9 929 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 CC2D1AQ6P1N0 951 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 RSRC2Q7L4I2 434 aaKnown RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 PIGZQ86VD9 579 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 FAM71AQ8IYT1 594 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 MAB21L3Q8N8X9 362 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 SCAMP5Q8TAC9 235 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 FEZF2Q8TBJ5 459 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 IPO4Q8TEX9 1081 aaKnown RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 ZNF606Q8WXB4 792 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 OVCA2Q8WZ82 227 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 SMARCD2Q92925 531 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 NXPE3Q969Y0 559 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 E2F7Q96AV8 911 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 GANQ9H2C0 597 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 THG1LQ9NWX6 298 aaKnown RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 CHORDC1Q9UHD1 332 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.37
ACTN1-214ENST00000555075 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.71□□□□□ -0.37
ACTN1-214ENST00000555075 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 BEST1O76090 585 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 CALCAP01258 141 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 F11P03951 625 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 FERP16591 822 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 HDCP19113 662 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 CCR2P41597 374 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 PSEN1P49768 467 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 TKTL1P51854 596 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 USP46P62068 366 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 GOLGA8FQ08AF8 430 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 GOLGA8DPQ0D2H9 430 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 NR1I3Q14994 352 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 HECTD3Q5T447 861 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 TXNDC8Q6A555 127 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 GAREM2Q75VX8 874 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 SLC47A2Q86VL8 602 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 MON1AQ86VX9 555 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 TTC30AQ86WT1 665 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 PASD1Q8IV76 773 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 TMEM35BQ8NCS4 154 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 CPLX3Q8WVH0 158 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 CDK5RAP1Q96SZ6 601 aaKnown RBP12.7□□□□□ -0.38
ACTN1-214ENST00000555075 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 XPO4Q9C0E2 1151 aaKnown RBP12.7□□□□□ -0.38
ACTN1-214ENST00000555075 MIS12Q9H081 205 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 GMIPQ9P107 970 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 NAGPAQ9UK23 515 aa12.7□□□□□ -0.38
ACTN1-214ENST00000555075 FAM86C2PA6NEL3 165 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 SART1O43290 800 aaKnown RBP12.69□□□□□ -0.38
ACTN1-214ENST00000555075 FBXO21O94952 628 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 ZBED1O96006 694 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 ASGR2P07307 311 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-214ENST00000555075 ALADP13716 330 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 CYP11B1P15538 503 aa12.69□□□□□ -0.38
ACTN1-214ENST00000555075 PLA2G4AP47712 749 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms