RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 CSNK1G1Q9HCP0 422 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 FAM114A2Q9NRY5 505 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 KLHL11Q9NVR0 708 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 PTPN22Q9Y2R2 807 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 TMEM189-UBE2V1I3L0A0 370 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 LIASO43766 372 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 HUS1O60921 280 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 PPFIA2O75334 1257 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 EOMESO95936 686 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 PDGFRBP09619 1106 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 SKIP12755 728 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 TFE3P19532 575 aaPredicted RBP9.35□□□□□ -0.91
TDP1-210ENST00000554976 KDELR1P24390 212 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 MIPP30301 263 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 PTPN9P43378 593 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 RGS7P49802 495 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 OASLQ15646 514 aaKnown RBP9.35□□□□□ -0.91
TDP1-210ENST00000554976 SPDYCQ5MJ68 293 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
TDP1-210ENST00000554976 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.91
TDP1-210ENST00000554976 MAIP1Q8WWC4 291 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 C1orf54Q8WWF1 131 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 RXFP2Q8WXD0 754 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 ATG4AQ8WYN0 398 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 VWCEQ96DN2 955 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 CNPY3Q9BT09 278 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 KRT1P04264 644 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ITGB1P05556 798 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 CD48P09326 243 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 PAX3P23760 479 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 IL4RP24394 825 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 PLEKHG4Q58EX7 1191 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 TFDP3Q5H9I0 405 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 VSIG1Q86XK7 387 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 HACE1Q8IYU2 909 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 SLC35B2Q8TB61 432 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 SH3TC2Q8TF17 1288 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 FAF2Q96CS3 445 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 HSFY1Q96LI6 401 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 GDAP1L1Q96MZ0 367 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 RAB17Q9H0T7 212 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 CASTOR2A6NHX0 329 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ZNF487B1APH4 448 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 F8W810 466 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 PIK3R2O00459 728 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 DDHD2O94830 711 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 EFEMP2O95967 443 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 KRT10P13645 584 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ADORA2BP29275 332 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 KCNJ1P48048 391 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 HDAC4P56524 1084 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 TUSC3Q13454 348 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 C15orf59Q2T9L4 293 aaPredicted RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 SYDE1Q6ZW31 735 aaPredicted RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 LRRC8DQ7L1W4 858 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 SCUBE3Q8IX30 993 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 COLGALT2Q8IYK4 626 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 ACSF2Q96CM8 615 aaPredicted RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 PGBD4Q96DM1 585 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 TNIP3Q96KP6 325 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 CFAP57Q96MR6 1250 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 SLC2A13Q96QE2 648 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 SMOQ99835 787 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 MIS12Q9H081 205 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 MTUS1Q9ULD2 1270 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 USP18Q9UMW8 372 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 UTP11Q9Y3A2 253 aaKnown RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 PI4K2BG5E9Z4 385 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 CLDN5O00501 218 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ACAT1P24752 427 aaKnown RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 LHX1P48742 406 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 RSPH1Q8WYR4 309 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 NKD2Q969F2 451 aaPredicted RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 SUSD3Q96L08 255 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 FAM129AQ9BZQ8 928 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 CRISPLD2Q9H0B8 497 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ELAC1Q9H777 363 aaKnown RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 AAASQ9NRG9 546 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ASNSD1Q9NWL6 643 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 DDX43Q9NXZ2 648 aaKnown RBP9.34□□□□□ -0.91
TDP1-210ENST00000554976 CDH9Q9ULB4 789 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
TDP1-210ENST00000554976 ALPK3Q96L96 1907 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 FYNP06241 537 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 KRT7P08729 469 aa9.33□□□□□ -0.92
TDP1-210ENST00000554976 SELPP16109 830 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms