RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	VSX1	Q9NZR4	365 aa	Predicted RBP	6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	TCEAL9	Q9UHQ7	104 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	CDYL	Q9Y232	598 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	NUP98	P52948	1817 aa		6.34	□□□□□ -1.4
PSMC6-208	ENST00000554956	DLG5	Q8TDM6	1919 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	ADM5	C9JUS6	153 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	APAF1	O14727	1248 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	DTNB	O60941	627 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	PPFIA4	O75335	1185 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	SLC43A1	O75387	559 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	CDKL5	O76039	1030 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	RPLP2	P05387	115 aa	Known RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	CT47B1	P0C2W7	299 aa	Predicted RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	RPS8	P62241	208 aa	Known RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	DPT	Q07507	201 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	TNIP1	Q15025	636 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	NFE2	Q16621	373 aa	Predicted RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	ZNF365	Q70YC5	407 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	TSPYL6	Q8N831	410 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	BEND2	Q8NDZ0	799 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	SUPT20H	Q8NEM7	779 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	TMIE	Q8NEW7	156 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	IL17RD	Q8NFM7	739 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	TBC1D16	Q8TBP0	767 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	NACC2	Q96BF6	587 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	CHFR	Q96EP1	664 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	KLHL32	Q96NJ5	620 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	JKAMP	Q9P055	326 aa		6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	DBF4	Q9UBU7	674 aa	Predicted RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	G3BP2	Q9UN86	482 aa	Known RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	SCAF8	Q9UPN6	1271 aa	Known RBP	6.33	□□□□□ -1.4
PSMC6-208	ENST00000554956	ECE2	O60344	883 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	FTL	P02792	175 aa	Predicted RBP	6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	HOXB7	P09629	217 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	MAP2K2	P36507	400 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	MAP2K6	P52564	334 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	SCAP	Q12770	1279 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	NOG	Q13253	232 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	ZNF267	Q14586	743 aa	Predicted RBP	6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	LAIR1	Q6GTX8	287 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	PCSK4	Q6UW60	755 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	C3orf20	Q8ND61	904 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	JPH3	Q8WXH2	748 aa	Predicted RBP	6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	MVB12A	Q96EY5	273 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	PNKP	Q96T60	521 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	MYD88	Q99836	296 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	C1orf43	Q9BWL3	253 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	TMX4	Q9H1E5	349 aa	Predicted RBP	6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	SLAMF7	Q9NQ25	335 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	HYPK	Q9NX55	129 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	KCNE5	Q9UJ90	142 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	ZNF180	Q9UJW8	692 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	ANKRD6	Q9Y2G4	727 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	MTO1	Q9Y2Z2	717 aa	Known RBP	6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	NOX1	Q9Y5S8	564 aa		6.32	□□□□□ -1.4
PSMC6-208	ENST00000554956	CDHR2	Q9BYE9	1310 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	ERN1	O75460	977 aa	Known RBP	6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	IGKV5-2	P06315	115 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	SMARCA1	P28370	1054 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	INHBC	P55103	352 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	HUNK	P57058	714 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	MXRA7	P84157	204 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	WDR43	Q15061	677 aa	Known RBP eCLIP	6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	CYP2A13	Q16696	494 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	GEN1	Q17RS7	908 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	PGS1	Q32NB8	556 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	SPDYE7P	Q495Y7	208 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	FOXR2	Q6PJQ5	311 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956		Q6YL49	198 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	MOB2	Q70IA6	237 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	G2E3	Q7L622	706 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	HEATR3	Q7Z4Q2	680 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	MRGPRG	Q86SM5	289 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	GPR149	Q86SP6	731 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	TPH2	Q8IWU9	490 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	GRAMD1C	Q8IYS0	662 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	NSUN7	Q8NE18	718 aa	Known RBP	6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	C8orf48	Q96LL4	319 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	LRGUK	Q96M69	825 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	NUP88	Q99567	741 aa	Predicted RBP	6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	MXD3	Q9BW11	206 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	IMPG2	Q9BZV3	1241 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	ABCF2	Q9UG63	623 aa		6.31	□□□□□ -1.4
PSMC6-208	ENST00000554956	THSD7B	Q9C0I4	1608 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956		A0A087X1B8	175 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	RAMP2	O60895	175 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	UFL1	O94874	794 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	FOS	P01100	380 aa	Predicted RBP	6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	PCCA	P05165	728 aa	Predicted RBP	6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	ITGAM	P11215	1152 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	AKAP5	P24588	427 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	PHKA1	P46020	1223 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	HK3	P52790	923 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	PSMC1	P62191	440 aa	Known RBP	6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	IFIT1B	Q5T764	474 aa	Known RBP	6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	FMNL3	Q8IVF7	1028 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	SH2D3C	Q8N5H7	860 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956		Q8NA96	180 aa		6.3	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms