RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 O00370 1275 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 PES1O00541 588 aaKnown RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 FGF19O95750 216 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 C7P10643 843 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 NPR3P17342 541 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 EEF1GP26641 437 aaKnown RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 NUBP1P53384 320 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 ZXDBP98169 803 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 ARHGAP15Q53QZ3 475 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 HFE2Q6ZVN8 426 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 ARL14EPQ8N8R7 260 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 USP13Q92995 863 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 ZFYVE19Q96K21 471 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 GCNAQ96QF7 691 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 LRFN3Q9BTN0 628 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 DUSP16Q9BY84 665 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 TRPV4Q9HBA0 871 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 ZFP14Q9HCL3 533 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 APEX2Q9UBZ4 518 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-214ENST00000554928 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 CA14Q9ULX7 337 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 GREB1Q4ZG55 1949 aa13.07□□□□□ -0.32
SYNE2-214ENST00000554928 EPHB6O15197 1021 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 CYP26A1O43174 497 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 SRFP11831 508 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 KRT5P13647 590 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 YWHAQP27348 245 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
SYNE2-214ENST00000554928 YWHAEP62258 255 aaKnown RBP13.06□□□□□ -0.32
SYNE2-214ENST00000554928 PDE4CQ08493 712 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 IQCB1Q15051 598 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 SGO2Q562F6 1265 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 TTC39CQ8N584 583 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 NDRG1Q92597 394 aaKnown RBP13.06□□□□□ -0.32
SYNE2-214ENST00000554928 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 NXPE3Q969Y0 559 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 LSM14BQ9BX40 385 aaKnown RBP13.06□□□□□ -0.32
SYNE2-214ENST00000554928 GPR88Q9GZN0 384 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 RNF38Q9H0F5 515 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 OSER1Q9NX31 292 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
SYNE2-214ENST00000554928 DNAJC12Q9UKB3 198 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 CNTN6Q9UQ52 1028 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 FHOD1Q9Y613 1164 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 OBSL1O75147 1896 aa13.06□□□□□ -0.32
SYNE2-214ENST00000554928 FAM92AA1XBS5 289 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 SHISA7A6NL88 538 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 MAP3K13O43283 966 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 GPR37L1O60883 481 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 ABL1P00519 1130 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 PAEPP09466 180 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 VDRP11473 427 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 GDI1P31150 447 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 KIF11P52732 1056 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 TMEM31Q5JXX7 168 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 KLHDC7AQ5VTJ3 777 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 SIX5Q8N196 739 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 ANKRD52Q8NB46 1076 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 CEP295NLQ96MC4 621 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-214ENST00000554928 CCSER2Q9H7U1 834 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 SLC2A4RGQ9NR83 387 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 TRPM5Q9NZQ8 1165 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 RAPGEFL1Q9UHV5 662 aa13.05□□□□□ -0.32
SYNE2-214ENST00000554928 ARNTLO00327 626 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 FOXN3O00409 490 aaPredicted RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 PIK3R2O00459 728 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 SCAMP3O14828 347 aaKnown RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 RTN3O95197 1032 aaPredicted RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 OAS1P00973 400 aaKnown RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 PSMC3P17980 439 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 RGS7P49802 495 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 ZNF165P49910 485 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 VCPP55072 806 aaKnown RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 CWF19L1Q69YN2 538 aaKnown RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 DENND1BQ6P3S1 775 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 BHLHA9Q7RTU4 235 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 TTC8Q8TAM2 541 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 SHC3Q92529 594 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 SECISBP2LQ93073 1101 aaKnown RBP13.04□□□□□ -0.32
SYNE2-214ENST00000554928 WBP2Q969T9 261 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 BPIFA3Q9BQP9 254 aa13.04□□□□□ -0.32
SYNE2-214ENST00000554928 C1QTNF1Q9BXJ1 281 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms