RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RBM6P78332 1123 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF543Q08ER8 600 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SLC13A2Q13183 592 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CTBP1Q13363 440 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 AMOTQ4VCS5 1084 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SLC44A4Q53GD3 710 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 C3orf38Q5JPI3 329 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 FAM160B1Q5W0V3 765 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TSHZ1Q6ZSZ6 1077 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 DPP9Q86TI2 863 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SESTD1Q86VW0 696 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 BOLLQ8N9W6 283 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PDPRQ8NCN5 879 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ACRBPQ8NEB7 543 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 GJA10Q969M2 543 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 NMD3Q96D46 503 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CCDC138Q96M89 665 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PNKPQ96T60 521 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 AIFM2Q9BRQ8 373 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 DPH1Q9BZG8 443 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 UNKQ9C0B0 810 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TINAGL1Q9GZM7 467 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PNPLA8Q9NP80 782 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 NLRC4Q9NPP4 1024 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 STK32BQ9NY57 414 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CFDP1Q9UEE9 299 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TESQ9UGI8 421 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 AFF4Q9UHB7 1163 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 KCNE5Q9UJ90 142 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 AGAP1Q9UPQ3 857 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CDYLQ9Y232 598 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PLEKHM1Q9Y4G2 1056 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 NOX1Q9Y5S8 564 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 COMMD10Q9Y6G5 202 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 BRCA2P51587 3418 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PRDM15P57071 1507 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 DIP2AQ14689 1571 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 GCC2Q8IWJ2 1684 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TRIM43BA6NCK2 446 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 RASA4BC9J798 803 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 E9PLN8 166 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 M0QYG6 137 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 POLRMTO00411 1230 aaKnown RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 RASA4O43374 803 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 KIF20AO95235 890 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 IL18RAPO95256 599 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 IGLV2-14P01704 120 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 PIM1P11309 404 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SERPINB3P29508 390 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 STT3AP46977 705 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SLC11A2P49281 568 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 RARRES1P49788 294 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 UCP3P55916 312 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 POU6F2P78424 691 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 MC2RQ01718 297 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 PIGFQ07326 219 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF844Q08AG5 666 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 RAB32Q13637 225 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 DAG1Q14118 895 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 MORC3Q14149 939 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SPDYE7PQ495Y7 208 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 CD300EQ496F6 205 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 LMBRD2Q68DH5 695 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SP5Q6BEB4 398 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 FOXR2Q6PJQ5 311 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 TOGARAM2Q6ZUX3 1019 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 CFAP52Q8N1V2 620 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 LNX2Q8N448 690 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 CCDC33Q8N5R6 958 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SLC15A4Q8N697 577 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 DNAJC5GQ8N7S2 189 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 FAM46DQ8NEK8 389 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SSH3Q8TE77 659 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 TRIM43Q96BQ3 446 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 PDLIM2Q96JY6 352 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 MSLNLQ96KJ4 702 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 RIPOR3Q96MK2 946 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 PSMD1Q99460 953 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SMOQ99835 787 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 VKORC1Q9BQB6 163 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 CNPPD1Q9BV87 410 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 BRIP1Q9BX63 1249 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF518BQ9C0D4 1074 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 SMURF2Q9HAU4 748 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 GALNT9Q9HCQ5 603 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 CASS4Q9NQ75 786 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 STARD7Q9NQZ5 370 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 MRPS18AQ9NVS2 196 aaKnown RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 COL20A1Q9P218 1284 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 XPR1Q9UBH6 696 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 TLK1Q9UKI8 766 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 MTO1Q9Y2Z2 717 aaKnown RBP1.84□□□□□ -2.11
PRPF39-208ENST00000554785 TMX2Q9Y320 296 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 DAAM1Q9Y4D1 1078 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 INSL6Q9Y581 213 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 PAXBP1Q9Y5B6 917 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 ERVK-7P63135 1459 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 LRRC9Q6ZRR7 1453 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 NLRP1Q9C000 1473 aa1.84□□□□□ -2.11
PRPF39-208ENST00000554785 ASXL1Q8IXJ9 1541 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 322.6 ms