RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 DHCR24Q15392 516 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 CRY1Q16526 586 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 WDR72Q3MJ13 1102 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 HSF5Q4G112 596 aaPredicted RBP13.29□□□□□ -0.28
RDH11-207ENST00000554731 TTC30AQ86WT1 665 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 DDX42Q86XP3 938 aaKnown RBP eCLIP13.29□□□□□ -0.28
RDH11-207ENST00000554731 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 MDGA1Q8NFP4 955 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 PNKPQ96T60 521 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 CGRRF1Q99675 332 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 ELOVL4Q9GZR5 314 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 CUEDC2Q9H467 287 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
RDH11-207ENST00000554731 KBTBD4Q9NVX7 518 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
RDH11-207ENST00000554731 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
RDH11-207ENST00000554731 GON4LQ3T8J9 2241 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 KLF8O95600 359 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 CST3P01034 146 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 APODP05090 189 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 MBL2P11226 248 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 BCKDHBP21953 392 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 SLC6A11P48066 632 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 CYP2J2P51589 502 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 CYP24A1Q07973 514 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 IFRD2Q12894 506 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 TRPC3Q13507 836 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 PSMD6Q15008 389 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 FAM26FQ5R3K3 315 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 TMEM92Q6UXU6 159 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 EPM2AIP1Q7L775 607 aaPredicted RBP13.28□□□□□ -0.28
RDH11-207ENST00000554731 ALLCQ8N6M5 410 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 ZNF507Q8TCN5 953 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 ZNF518BQ9C0D4 1074 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 DPEP3Q9H4B8 488 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 TMEM9BQ9NQ34 198 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 MTMR6Q9Y217 621 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 NME7Q9Y5B8 376 aa13.28□□□□□ -0.28
RDH11-207ENST00000554731 PTPRDP23468 1912 aa13.27□□□□□ -0.28
RDH11-207ENST00000554731 THADAQ6YHU6 1953 aa13.27□□□□□ -0.28
RDH11-207ENST00000554731 NUP205Q92621 2012 aa13.27□□□□□ -0.28
RDH11-207ENST00000554731 ANTXRLA6NF34 631 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 A8MXQ7 604 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 CLIC2O15247 247 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 SPTLC2O15270 562 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 TGFB1I1O43294 461 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 RTN3O95197 1032 aaPredicted RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 KAT7O95251 611 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 ADH5P11766 374 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 YWHAQP27348 245 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 TIE1P35590 1138 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 GRIA2P42262 883 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 CACNA2D1P54289 1103 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 SNRPFP62306 86 aaKnown RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 E2F4Q16254 413 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 EOGTQ5NDL2 527 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 NUP93Q8N1F7 819 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 IL17RCQ8NAC3 791 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 XXYLT1Q8NBI6 393 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 TXNDC5Q8NBS9 432 aaKnown RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 LINC00301Q8NCQ3 95 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 PDZD8Q8NEN9 1154 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 WHAMMQ8TF30 809 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 PIGKQ92643 395 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 DHX58Q96C10 678 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 INTS4Q96HW7 963 aaKnown RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 SPACA7Q96KW9 195 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 B3GNT5Q9BYG0 378 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 POLMQ9NP87 494 aaPredicted RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 ARHGEF4Q9NR80 690 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 TMEM30AQ9NV96 361 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
RDH11-207ENST00000554731 UBE4BO95155 1302 aa13.27□□□□□ -0.29
RDH11-207ENST00000554731 A0A0A0MRY4 1105 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 PATE3B3GLJ2 98 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 SGK1O00141 431 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 CLDN5O00501 218 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 GIPC1O14908 333 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 MAP3K13O43283 966 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 STX6O43752 255 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
RDH11-207ENST00000554731 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
RDH11-207ENST00000554731 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
RDH11-207ENST00000554731 ATICP31939 592 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms