RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 RNF219Q5W0B1 726 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 GIMAP7Q8NHV1 300 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 GSDMBQ8TAX9 411 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 MS4A4AQ96JQ5 239 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 PCDHB18PQ96TA0 734 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 TMEM121Q9BTD3 319 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 H3BRJ5 948 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 C22orf31O95567 290 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 LRG1P02750 347 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 HOXD13P35453 343 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 RBM23Q86U06 439 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 ATP11CQ8NB49 1132 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 NIFKQ9BYG3 293 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 PPME1Q9Y570 386 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 MYO5AQ9Y4I1 1855 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 IGFBP4P22692 258 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 ARL2P36404 184 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 ETFBP38117 255 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 TTC25Q96NG3 672 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 ZNF518BQ9C0D4 1074 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
PPP4R3A-205ENST00000554684 PSTPIP1O43586 416 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 SEC24CP53992 1094 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 ATP13A4Q4VNC1 1196 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 MCUQ8NE86 351 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 PAWRQ96IZ0 340 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 TPX2Q9ULW0 747 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 CHMP2BQ9UQN3 213 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 SMIM35A0A1B0GVV1 85 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 E5RJQ4 531 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 ATP9BO43861 1147 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 PPP1R37O75864 691 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 KRT37O76014 449 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 ACTL9Q8TC94 416 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 FAM172AQ8WUF8 416 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 SP110Q9HB58 689 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 IQANK1A0A1B0GTG1 560 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 LSM8O95777 96 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 RABGGTBP53611 331 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 OTUD4Q01804 1114 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 MTFR1Q15390 333 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 GDF6Q6KF10 455 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 NECAB2Q7Z6G3 386 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 CDKL3Q8IVW4 592 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 CYP3A43Q9HB55 503 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 RPTORQ8N122 1335 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 RASSF10A6NK89 507 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 NEMP1O14524 444 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 TSPAN1O60635 241 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 MYL4P12829 197 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 GARSP41250 739 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 MAGEA4P43358 317 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 LBX1P52954 281 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 DENND1BQ6P3S1 775 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 MFSD7Q6UXD7 560 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 ALG3Q92685 438 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 EPAS1Q99814 870 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 FSD1LQ9BXM9 530 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 PITPNM3Q9BZ71 974 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 CCDC68Q9H2F9 335 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 AAASQ9NRG9 546 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 PCDHB12Q9Y5F1 795 aa16.85■□□□□ 0.29
PPP4R3A-205ENST00000554684 MYH1P12882 1939 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 KLRC2P26717 231 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 TFDP3Q5H9I0 405 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 NOMO2Q5JPE7 1267 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 IL31Q6EBC2 164 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 ZNF662Q6ZS27 426 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 SYDE1Q6ZW31 735 aaPredicted RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 PPP4R1Q8TF05 950 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 ATXN7L3BQ96GX2 97 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 ALG13Q9NP73 1137 aaKnown RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 PCDHA3Q9Y5H8 950 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 MYADML2A6NDP7 307 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 RPL7AP62424 266 aaKnown RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 BOLA3Q53S33 107 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 C4orf33Q8N1A6 199 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 MDM1Q8TC05 714 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 RPRD1AQ96P16 312 aaPredicted RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 SLC13A1Q9BZW2 595 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 XPO7Q9UIA9 1087 aaKnown RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 USP18Q9UMW8 372 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 SCN9AQ15858 1988 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 ATICP31939 592 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 RECQLP46063 649 aaPredicted RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 BCAT1P54687 386 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 KLF6Q99612 283 aaPredicted RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 CEP41Q9BYV8 373 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 PABPC3Q9H361 631 aaKnown RBP16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 SEMA4AQ9H3S1 761 aa16.84■□□□□ 0.29
PPP4R3A-205ENST00000554684 WDCPQ9H6R7 721 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms