RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TBCAO75347 108 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TOM1L1O75674 476 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 FAM13AO94988 1023 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PRSS23O95084 383 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PRKAR2AP13861 404 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ZFP36L2P47974 494 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NLRP11P59045 1033 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ACTR2P61160 394 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ENOX2Q16206 610 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 HSP90AA4PQ58FG1 418 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 FAM47CQ5HY64 1035 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PM20D1Q6GTS8 502 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ASTLQ6HA08 431 aaPredicted RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 METTL7BQ6UX53 244 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 RNF111Q6ZNA4 994 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DAAM2Q86T65 1068 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 UHMK1Q8TAS1 419 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 RDH11Q8TC12 318 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 GRIN3AQ8TCU5 1115 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 EPS8L3Q8TE67 593 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 U2AF1L4Q8WU68 220 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NRG4Q8WWG1 115 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TFAP2BQ92481 460 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ATP6V0A1Q93050 837 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 LRGUKQ96M69 825 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 AGBL1Q96MI9 1066 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NT5C1BQ96P26 610 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 GPR78Q96P69 363 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 C16orf70Q9BSU1 422 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 BRD8Q9H0E9 1235 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 RNPEPL1Q9HAU8 725 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NOD2Q9HC29 1040 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 STX18Q9P2W9 335 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 SLC9A2Q9UBY0 812 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 GOLGA6L10A0A0M3HER8 536 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 FAM47DPA6NHR8 397 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TMEM114B3SHH9 223 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 H0YIN7 160 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 OGTO15294 1046 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 MMP10P09238 476 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 IQCF3P0C7M6 154 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 AXLP30530 894 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CXCR5P32302 372 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SATB1Q01826 763 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CXCL9Q07325 125 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PTK7Q13308 1070 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 MXD4Q14582 209 aaPredicted RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PABPC1LQ4VXU2 614 aaKnown RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CCDC38Q502W7 563 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 HSP90B2PQ58FF3 399 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 ODR4Q5SWX8 454 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 FNBP1LQ5T0N5 605 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 OGFRL1Q5TC84 451 aaPredicted RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 GKAP1Q5VSY0 366 aaPredicted RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 AGMOQ6ZNB7 445 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 C4orf50Q6ZRC1 276 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 OTUD6AQ7L8S5 288 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SLC26A9Q7LBE3 791 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 MIER3Q7Z3K6 550 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SPATA21Q7Z572 469 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CCDC91Q7Z6B0 441 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TMEM135Q86UB9 458 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SLC26A11Q86WA9 606 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CCNJLQ8IV13 435 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CACNA2D3Q8IZS8 1091 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CCDC82Q8N4S0 544 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 GLIS1Q8NBF1 620 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PPTC7Q8NI37 304 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 KBTBD7Q8WVZ9 684 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF606Q8WXB4 792 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PEX13Q92968 403 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CDK5RAP3Q96JB5 506 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SNX27Q96L92 541 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 DDX23Q9BUQ8 820 aaKnown RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 MAK16Q9BXY0 300 aaKnown RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 NIF3L1Q9GZT8 377 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 AZI2Q9H6S1 392 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 C10orf88Q9H8K7 445 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 XAB2Q9HCS7 855 aaKnown RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CD248Q9HCU0 757 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 CASS4Q9NQ75 786 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 ABCF3Q9NUQ8 709 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 COMMD8Q9NX08 183 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 FBXO40Q9UH90 709 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 ZNHIT2Q9UHR6 403 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PCDHA11Q9Y5I1 949 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 USH1CQ9Y6N9 552 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SPDYE5A6NIY4 337 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TISP43B9A030 160 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF701M0R085 212 aaPredicted RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PPP1R12BO60237 982 aaPredicted RBP3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TMEM63AO94886 807 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 SLC25A27O95847 323 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 GAS8O95995 478 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 PEX11BO96011 259 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 LINGO3P0C6S8 592 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TRIM49P0CI25 452 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TRIM49CP0CI26 452 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 TNFAIP3P21580 790 aa3.61□□□□□ -1.83
SEC23A-207ENST00000554615 UBA1P22314 1058 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms