RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 OR52Z1P0C646 297 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 AKR1D1P51857 326 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CDH6P55285 790 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 DMPKQ09013 629 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 RARS2Q5T160 578 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 Q7L0L9 218 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MB21D1Q8N884 522 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 DHX38Q92620 1227 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PTPN18Q99952 460 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 DNAJB11Q9UBS4 358 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TRMT6Q9UJA5 497 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OTOFQ9HC10 1997 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 EVPLQ92817 2033 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 AATKQ6ZMQ8 1374 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ANKRD36BQ8N2N9 1353 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CPED1A4D0V7 1026 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GPR89AB7ZAQ6 455 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ARHGAP6O43182 974 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PRKCGP05129 697 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GPR89BP0CG08 455 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 EDN3P14138 238 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KLK7P49862 253 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KBTBD12Q3ZCT8 623 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF618Q5T7W0 954 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SLC7A3Q8WY07 619 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 RAB17Q9H0T7 212 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM245Q9H330 911 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TAF1BQ53T94 588 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 Q8N9G6 341 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM51Q9BSJ1 452 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 IRS2Q9Y4H2 1338 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 BFSP2Q13515 415 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 HMGN2P46Q86SG4 172 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NDRG1Q92597 394 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PGBD4Q96DM1 585 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF354BQ96LW1 612 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TUBGCP2Q9BSJ2 902 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM63CQ9P1W3 806 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SLC30A1Q9Y6M5 507 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CUX1P39880 1505 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PSMD12O00232 456 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 DNTTP04053 509 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NPR2P20594 1047 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 C4orf46Q504U0 113 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ARHGAP15Q53QZ3 475 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM270Q6UE05 265 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MAP3K15Q6ZN16 1313 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 BZW1Q7L1Q6 419 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MLKLQ8NB16 471 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TOR1AIP2Q8NFQ8 470 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PYROXD1Q8WU10 500 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TBCDQ9BTW9 1192 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 HTATIP2Q9BUP3 242 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TEX12Q9BXU0 123 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 STK33Q9BYT3 514 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MEAF6Q9HAF1 191 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KIAA1586Q9HCI6 787 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TXLNGQ9NUQ3 528 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 INTS9Q9NV88 658 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GOLGA8QA0A0J9YX86 632 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SYNCRIPO60506 623 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GJB1P08034 283 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 UBA1P22314 1058 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CASP14P31944 242 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ATXN1P54253 815 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CRTC2Q53ET0 693 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 HGSNATQ68CP4 663 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GET4Q7L5D6 327 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NECAB2Q7Z6G3 386 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZBED8Q8IZ13 594 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ELMO1Q92556 727 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF285Q96NJ3 590 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KIFC1Q9BW19 673 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 LOC100653049A0A140TA62 436 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KRT34O76011 436 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PER3P56645 1201 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TPI1P60174 286 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GOLGA7BQ2TAP0 167 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NFRKBQ6P4R8 1299 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OSER1Q9NX31 292 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 XPO7Q9UIA9 1087 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PNMA8CA0A1B0GUJ8 204 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 A6NCN8 305 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 C9IYK1 514 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ALDH1L1O75891 902 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GJA9P57773 515 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 IL9RQ01113 521 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 COASYQ13057 564 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PDAP1Q13442 181 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 KRT31Q15323 416 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PRAMEF14Q5SWL7 426 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 OR5M3Q8NGP4 307 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ARMC5Q96C12 935 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CINPQ9BW66 212 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 PRKD2Q9BZL6 878 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ARMCX3Q9UH62 379 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ANGPTL2Q9UKU9 493 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SLC39A10Q9ULF5 831 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ADCYAP1R1P41586 468 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms