RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZNF268Q14587 947 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 CCDC142Q17RM4 750 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 NCAPGQ9BPX3 1015 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 ARHGEF3Q9NR81 526 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 MCM8Q9UJA3 840 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 USH1CQ9Y6N9 552 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 UNC5CO95185 931 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 INSRRP14616 1297 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 TRNP1Q6NT89 227 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAM183BPQ6ZVS7 135 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPP1R13LQ8WUF5 828 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAF2Q96CS3 445 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 SMARCAD1Q9H4L7 1026 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 IFT122Q9HBG6 1241 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 ASNSD1Q9NWL6 643 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 TNFSF13BQ9Y275 285 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 IKBKGQ9Y6K9 419 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 KBTBD13C9JR72 458 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 GAS2O43903 313 aaKnown RBP16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 LGR5O75473 907 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 IL18RAPO95256 599 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 GPD2P43304 727 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 MOGSQ13724 837 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZC3H12AQ5D1E8 599 aaKnown RBP16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 MPHOSPH6Q99547 160 aaKnown RBP16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAM49BQ9NUQ9 324 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAM155BO75949 473 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 DDNO94850 711 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 ANP32DO95626 131 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZNF286BP0CG31 522 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 CYP3A5P20815 502 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 GPD1P21695 349 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 ACVR2BQ13705 512 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 ASRGL1Q7L266 308 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 CTAGE3PQ8IX95 158 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 KCNV2Q8TDN2 545 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 ACSS3Q9H6R3 686 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 RAB6BQ9NRW1 208 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 WDR35Q9P2L0 1181 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 TSPAN16Q9UKR8 245 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 A0A0G2JND7 137 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 F5H423 210 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 KCNN4O15554 427 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 PRPSAP2O60256 369 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 HBP1O60381 514 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 MT-ND3P03897 115 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 ALDH3A1P30838 453 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 PHKA2P46019 1235 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 PTK7Q13308 1070 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 KLHL38Q2WGJ6 581 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 KBTBD12Q3ZCT8 623 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 FNIP1Q8TF40 1166 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 DCAKDQ8WVC6 231 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 NLRP7Q8WX94 980 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 TTC17Q96AE7 1141 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 TXLNGQ9NUQ3 528 aa16.38■□□□□ 0.21
ARHGEF40-203ENST00000554514 TMEM132DQ14C87 1099 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 SLC10A6Q3KNW5 377 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 TAF1BQ53T94 588 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 ADGRD1Q6QNK2 874 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 CMASQ8NFW8 434 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 MAGEC3Q8TD91 643 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 LPIN3Q9BQK8 851 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 PDZD7Q9H5P4 517 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 RBPJLQ9UBG7 517 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 MAGEB2O15479 319 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 C22orf31O95567 290 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 ARF4P18085 180 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAAP100Q0VG06 881 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 FYB2Q5VWT5 728 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 SULF1Q8IWU6 871 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 NSMCE1Q8WV22 266 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 C10orf82Q8WW14 230 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 PTPRN2Q92932 1015 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 MCRS1Q96EZ8 462 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 FAM111AQ96PZ2 611 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 MYCBPQ99417 103 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 MIS12Q9H081 205 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 CXCL16Q9H2A7 254 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
ARHGEF40-203ENST00000554514 TCRBV9S1A1TA0A576 114 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 LPXNO60711 386 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 ZWINTO95229 277 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 INHBAP08476 426 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 ATP2A2P16615 1042 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 GOLGA7BQ2TAP0 167 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 NLRP9Q7RTR0 991 aa16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 MTDHQ86UE4 582 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-203ENST00000554514 LRRC6Q86X45 466 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms