RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ORC1Q13415 861 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 CAMK4Q16566 473 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 PAQR9Q6ZVX9 377 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 NUP93Q8N1F7 819 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 PDZD8Q8NEN9 1154 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 OVCA2Q8WZ82 227 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 LRRC3BQ96PB8 259 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 TWNKQ96RR1 684 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 C8orf33Q9H7E9 229 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-211ENST00000554310 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 GCNT4Q9P109 453 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 CCL26Q9Y258 94 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 ZNF840PA6NDX5 716 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 PMM2O15305 246 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 NCAM2O15394 837 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 P4HA2O15460 535 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 DCNP07585 359 aaKnown RBP13.84□□□□□ -0.19
SHMT2-211ENST00000554310 FAM200BP0CF97 657 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 CCDC192P0DO97 292 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 TCF3P15923 654 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 TARSP26639 723 aaKnown RBP13.84□□□□□ -0.19
SHMT2-211ENST00000554310 YWHAQP27348 245 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 FMO5P49326 533 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 SLC5A3P53794 718 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 MARSP56192 900 aaKnown RBP13.84□□□□□ -0.19
SHMT2-211ENST00000554310 CC2D1AQ6P1N0 951 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-211ENST00000554310 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 C12orf29Q8N999 325 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 WHAMMQ8TF30 809 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 HNRNPABQ99729 332 aaKnown RBP13.84□□□□□ -0.19
SHMT2-211ENST00000554310 CSNK1G1Q9HCP0 422 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 PNPLA8Q9NP80 782 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 CISHQ9NSE2 258 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 COMMD8Q9NX08 183 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 RWDD2AQ9UIY3 292 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 ARHGAP26Q9UNA1 814 aa13.84□□□□□ -0.19
SHMT2-211ENST00000554310 FAM92AA1XBS5 289 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 C2orf78A6NCI8 922 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 SHISA7A6NL88 538 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 TNFRSF10BO14763 440 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 FGFR1OPO95684 399 aaKnown RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 OLFM2O95897 454 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 HDCP19113 662 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 CD72P21854 359 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 TBXAS1P24557 533 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 ADORA2BP29275 332 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 RPS9P46781 194 aaKnown RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 KPNA1P52294 538 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 STX17P56962 302 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 YWHAEP62258 255 aaKnown RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 CETN1Q12798 172 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 IFRD2Q12894 506 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 TAF10Q12962 218 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 CUL2Q13617 745 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 MTF1Q14872 753 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 PDGFRLQ15198 375 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 ZNF77Q15935 545 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 RALGPS2Q86X27 583 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 TRIM59Q8IWR1 403 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-211ENST00000554310 ZMIZ2Q8NF64 920 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 FAM3CQ92520 227 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 FBXO32Q969P5 355 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 CLDN23Q96B33 292 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 ZFYVE19Q96K21 471 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 SLC22A12Q96S37 553 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 SMOQ99835 787 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 ARID3AQ99856 593 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 FAM83CQ9BQN1 747 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 IER2Q9BTL4 223 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 IL37Q9NZH6 218 aa13.83□□□□□ -0.2
SHMT2-211ENST00000554310 CACNA1IQ9P0X4 2223 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 H0Y858 1186 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 OAS1P00973 400 aaKnown RBP13.82□□□□□ -0.2
SHMT2-211ENST00000554310 CTHP32929 405 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 TUBP50607 506 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 SLC7A9P82251 487 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 ANGPT1Q15389 498 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 CLEC20AQ6ZU45 233 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 ZNF687Q8N1G0 1237 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 KIAA1958Q8N8K9 716 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 RIN3Q8TB24 985 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 CYP2S1Q96SQ9 504 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 FBXO44Q9H4M3 255 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 GTSE1Q9NYZ3 720 aa13.82□□□□□ -0.2
SHMT2-211ENST00000554310 MTF2Q9Y483 593 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-211ENST00000554310 SPECC1L-ADORA2AF8WAN1 911 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 BEST1O76090 585 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 SOX9P48436 509 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 TNK2Q07912 1038 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 ZNF394Q53GI3 561 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 SNX30Q5VWJ9 437 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 C1orf210Q8IVY1 113 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms