RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ACSF2Q96CM8 615 aaPredicted RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 DDX27Q96GQ7 796 aaKnown RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 SNX27Q96L92 541 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 ROPN1BQ9BZX4 212 aaPredicted RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 ROPN1Q9HAT0 212 aaPredicted RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 GOLGA2P5Q9HBQ8 144 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 ARHGEF3Q9NR81 526 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 PRKAG3Q9UGI9 489 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 ARL2BPQ9Y2Y0 163 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 PI4K2BG5E9Z4 385 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 MICAL2O94851 1124 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 FOXN2P32314 431 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 RFC1P35251 1148 aaPredicted RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 MSH2P43246 934 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 ITGA8P53708 1063 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 CAP1Q01518 475 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 MFSD14CQ5VZR4 134 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 TWF2Q6IBS0 349 aaKnown RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 ASRGL1Q7L266 308 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 RHOT1Q8IXI2 618 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 VRTNQ9H8Y1 702 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 PLEKHA5Q9HAU0 1116 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 IP6K2Q9UHH9 426 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 BARX2Q9UMQ3 279 aaPredicted RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 AOC2O75106 756 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 IGHA2P01877 340 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 RALAP11233 206 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 IVDP26440 423 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 SLC8A3P57103 927 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 PSMC1P62191 440 aaKnown RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 PPP1R2P3Q6NXS1 205 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 ECHDC2Q86YB7 292 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 SRRM1Q8IYB3 904 aaKnown RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 EMC1Q8N766 993 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 UTP4Q969X6 686 aaKnown RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 SERPINB12Q96P63 405 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 MRPL45Q9BRJ2 306 aaKnown RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 CYP3A43Q9HB55 503 aa15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 R3HDM2Q9Y2K5 976 aaKnown RBP15.37■□□□□ 0.05
PPP4R3A-201ENST00000554308 ZNF236Q9UL36 1845 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 UPP2O95045 317 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 TTC4O95801 387 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 KRT3P12035 628 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 ELNP15502 786 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 CRYBB1P53674 252 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 RNASELQ05823 741 aaKnown RBP15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 ACOT1Q86TX2 421 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 LRRC19Q9H756 370 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 RXFP1Q9HBX9 757 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 NINJ2Q9NZG7 142 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 CITO14578 2027 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 HCRTO43612 131 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 CYBAP13498 195 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 STX2P32856 288 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 CDH5P33151 784 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 KAZNQ674X7 775 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 NT5DC4Q86YG4 428 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 C12orf50Q8NA57 414 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 BEST2Q8NFU1 509 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 NT5C1AQ9BXI3 368 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 LHX5Q9H2C1 402 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 FAM49BQ9NUQ9 324 aa15.36■□□□□ 0.05
PPP4R3A-201ENST00000554308 TCRBV5S1A1TA0A578 114 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 ERBB2P04626 1255 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 CCND1P24385 295 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 CCNHP51946 323 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 ZBTB6Q15916 424 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 NAIF1Q69YI7 327 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 GDF6Q6KF10 455 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 ALKAL1Q6UXT8 129 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 ANKS1BQ7Z6G8 1248 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 OR6B3Q8NGW1 331 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 C9orf72Q96LT7 481 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 PAIP2Q9BPZ3 127 aaKnown RBP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 SPC25Q9HBM1 224 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 WHRNQ9P202 907 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 NKX1-2Q9UD57 310 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 IPPQ9Y573 584 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 FSCN2O14926 492 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 RARBP10826 455 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 KRT10P13645 584 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 GPD2P43304 727 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 ARRDC4Q8NCT1 418 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 WNT8BQ93098 351 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 ZFP42Q96MM3 310 aa15.35■□□□□ 0.05
PPP4R3A-201ENST00000554308 TMEM237Q96Q45 408 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms