RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 MAN1B1Q9UKM7 699 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 MMP17Q9ULZ9 603 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 DERAQ9Y315 318 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 FLNBO75369 2602 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 IGSF10Q6WRI0 2623 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 ASH1LQ9NR48 2969 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 A0A0B4J269 797 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 PDXKO00764 312 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 TADA3O75528 432 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 NOL4O94818 638 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 LDHAP00338 332 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 CSH1P0DML2 217 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 CSH2P0DML3 217 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 HARSP12081 509 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 ENGP17813 658 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 RDXP35241 583 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 OPRD1P41143 372 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 TNFSF9P41273 254 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 DHPSP49366 369 aaPredicted RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 GUCY2FP51841 1108 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 SIM1P81133 766 aaPredicted RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 MRPS21P82921 87 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 KCNA1Q09470 495 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 USP4Q13107 963 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 NR1H3Q13133 447 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 STIM1Q13586 685 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 ZNF423Q2M1K9 1284 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 UAP1L1Q3KQV9 507 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 HSF5Q4G112 596 aaPredicted RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 KIAA1211LQ6NV74 962 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 SLC39A4Q6P5W5 647 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 FOXR2Q6PJQ5 311 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 NELFCDQ8IXH7 590 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 C12orf56Q8IXR9 622 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 DCP1BQ8IZD4 617 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 THEM5Q8N1Q8 247 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 GLIS3Q8NEA6 775 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 MDGA1Q8NFP4 955 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 CEP76Q8TAP6 659 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 MRPS31Q92665 395 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 ERCC4Q92889 916 aaPredicted RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 TPSD1Q9BZJ3 242 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 KCTD10Q9H3F6 313 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 KIAA1586Q9HCI6 787 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 AGPAT3Q9NRZ7 376 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 DUS2Q9NX74 493 aaKnown RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 GCNT4Q9P109 453 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 ANKFY1Q9P2R3 1169 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 UXTQ9UBK9 157 aaPredicted RBP8.27□□□□□ -1.09
ABCD4-220ENST00000553998 PILRBQ9UKJ0 227 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 TRAF3IP3Q9Y228 551 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 INVSQ9Y283 1065 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 SCN1AP35498 2009 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 DENND4CQ5VZ89 1909 aa8.27□□□□□ -1.09
ABCD4-220ENST00000553998 ZNF638Q14966 1978 aaKnown RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 SPAG17Q6Q759 2223 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 KIF26AQ9ULI4 1882 aaPredicted RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 SPAARA0A1B0GVQ0 90 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 ANKRD63C9JTQ0 380 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 CYB561D2O14569 222 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 PSMA7O14818 248 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 OGTO15294 1046 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 LETM1O95202 739 aaPredicted RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 USP17L7P0C7H9 530 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 HNRNPLP14866 589 aaKnown RBP eCLIP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 ADSSP30520 456 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 HOXD13P35453 343 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 PTGER3P43115 390 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 FAM193AP78312 1265 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 BYSLQ13895 437 aaKnown RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 NFIL3Q16649 462 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 GAB4Q2WGN9 574 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 MAP7D1Q3KQU3 841 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 CT47A1Q5JQC4 288 aaPredicted RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 ANO7Q6IWH7 933 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 TMEM92Q6UXU6 159 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 LPCAT2Q7L5N7 544 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 PDZD3Q86UT5 571 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 METTL23Q86XA0 190 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 SLC9A9Q8IVB4 645 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 MLKLQ8NB16 471 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 POMGNT1Q8WZA1 660 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 DHTKD1Q96HY7 919 aaPredicted RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 SLC22A12Q96S37 553 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 MSTO1Q9BUK6 570 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 LINC00597Q9H2U6 94 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 ASB7Q9H672 318 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 RPF1Q9H9Y2 349 aaKnown RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 CAPN10Q9HC96 672 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 ABCB6Q9NP58 842 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 MBD1Q9UIS9 605 aaPredicted RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 CPSF3Q9UKF6 684 aaKnown RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 AGO2Q9UKV8 859 aaKnown RBP8.26□□□□□ -1.09
ABCD4-220ENST00000553998 SLC6A14Q9UN76 642 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 C2CD2Q9Y426 696 aa8.26□□□□□ -1.09
ABCD4-220ENST00000553998 PCDHB5Q9Y5E4 795 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms