RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CPQQ9Y646 472 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 ATG2BQ96BY7 2078 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 LEFTY2O00292 366 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 OAS1P00973 400 aaKnown RBP19.34■□□□□ 0.69
SHMT2-206ENST00000553529 MESP2Q0VG99 397 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 CCINQ13939 588 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 LPAL2Q16609 132 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 GAB4Q2WGN9 574 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 EML3Q32P44 896 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 EDRF1Q3B7T1 1238 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 RALGPS2Q86X27 583 aaPredicted RBP19.34■□□□□ 0.69
SHMT2-206ENST00000553529 FBXO32Q969P5 355 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 C8orf33Q9H7E9 229 aaPredicted RBP19.34■□□□□ 0.69
SHMT2-206ENST00000553529 TMEM8AQ9HCN3 771 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 OSER1Q9NX31 292 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 DUS2Q9NX74 493 aaKnown RBP19.34■□□□□ 0.69
SHMT2-206ENST00000553529 TRPM5Q9NZQ8 1165 aa19.34■□□□□ 0.69
SHMT2-206ENST00000553529 HHLA1C9JL84 531 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 KIF20AO95235 890 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 CALCAP01258 141 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 FAM163BP0C2L3 166 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 GJA4P35212 333 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 PXNP49023 591 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 ZNF268Q14587 947 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 HEATR6Q6AI08 1181 aaKnown RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 KLHL10Q6JEL2 608 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 ZC3H3Q8IXZ2 948 aaKnown RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 NUP93Q8N1F7 819 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 SUMF1Q8NBK3 374 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 OSCP1Q8WVF1 389 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 ZFRQ96KR1 1074 aaKnown RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 DUSP9Q99956 384 aaKnown RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 NIF3L1Q9GZT8 377 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 ECT2Q9H8V3 914 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 KIF9Q9HAQ2 790 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 THG1LQ9NWX6 298 aaKnown RBP19.33■□□□□ 0.68
SHMT2-206ENST00000553529 ARHGAP26Q9UNA1 814 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 PIEZO1Q92508 2521 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 MYH10P35580 1976 aa19.33■□□□□ 0.68
SHMT2-206ENST00000553529 KIAA1549LQ6ZVL6 1849 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CFAP54Q96N23 3096 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 K7ESF4 209 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 NCAM2O15394 837 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CYP26A1O43174 497 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 COCHO43405 550 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 OLFM2O95897 454 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 RPL13P26373 211 aaKnown RBP19.32■□□□□ 0.68
SHMT2-206ENST00000553529 YWHAQP27348 245 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 MXI1P50539 228 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 GALK1P51570 392 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 PLCB2Q00722 1185 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 INCA1Q0VD86 236 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 LRMPQ12912 555 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 TCERG1LQ5VWI1 586 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CLEC20AQ6ZU45 233 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 FILIP1Q7Z7B0 1213 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CRYBG2Q8N1P7 616 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 NELL1Q92832 810 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 SMARCD1Q96GM5 515 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 GSDMAQ96QA5 445 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 DMAP1Q9NPF5 467 aaPredicted RBP19.32■□□□□ 0.68
SHMT2-206ENST00000553529 RMND1Q9NWS8 449 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CFAP97Q9P2B7 532 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 NUDT5Q9UKK9 219 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 FBXO4Q9UKT5 387 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
SHMT2-206ENST00000553529 CHURC1-FNTBB4DL54 471 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 PPP1R3GB7ZBB8 358 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 MDM4O15151 490 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 CETN3O15182 167 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 CILPO75339 1184 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 TBX18O95935 607 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 LMNAP02545 664 aaKnown RBP19.31■□□□□ 0.68
SHMT2-206ENST00000553529 EPB41P11171 864 aaKnown RBP19.31■□□□□ 0.68
SHMT2-206ENST00000553529 MBL2P11226 248 aaPredicted RBP19.31■□□□□ 0.68
SHMT2-206ENST00000553529 FNTBP49356 437 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 STX17P56962 302 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 TMEM196Q5HYL7 178 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 PPP1R26Q5T8A7 1209 aaPredicted RBP19.31■□□□□ 0.68
SHMT2-206ENST00000553529 KRT39Q6A163 491 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 CC2D1AQ6P1N0 951 aaPredicted RBP19.31■□□□□ 0.68
SHMT2-206ENST00000553529 C12orf40Q86WS4 652 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 ZBTB44Q8NCP5 570 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 TAF4BQ92750 862 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 TNIP3Q96KP6 325 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 NMUR1Q9HB89 426 aa19.31■□□□□ 0.68
SHMT2-206ENST00000553529 SMC2O95347 1197 aa19.3■□□□□ 0.68
SHMT2-206ENST00000553529 IRF1P10914 325 aa19.3■□□□□ 0.68
SHMT2-206ENST00000553529 IFNAR2P48551 515 aa19.3■□□□□ 0.68
SHMT2-206ENST00000553529 MLLT6P55198 1093 aaPredicted RBP19.3■□□□□ 0.68
SHMT2-206ENST00000553529 MCCD1P59942 119 aaPredicted RBP19.3■□□□□ 0.68
SHMT2-206ENST00000553529 KAT5Q92993 513 aa19.3■□□□□ 0.68
SHMT2-206ENST00000553529 ZDHHC4Q9NPG8 344 aa19.3■□□□□ 0.68
SHMT2-206ENST00000553529 MYOFQ9NZM1 2061 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 TULP2O00295 520 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 LILRB5O75023 590 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 RNF40O75150 1001 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 CYP17A1P05093 508 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 P4HA1P13674 534 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms