RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 TBCBQ99426 244 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 PSMB7Q99436 277 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 RHOXF2Q9BQY4 288 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 SNX25Q9H3E2 840 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 RNF19AQ9NV58 838 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 CHORDC1Q9UHD1 332 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 TRIM17Q9Y577 477 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 F8VP50 259 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 RAD51CO43502 376 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 LRCH4O75427 683 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 RARAP10276 462 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 MLH1P40692 756 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 CETN2P41208 172 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 CLCNKBP51801 687 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 AFF1P51825 1210 aaKnown RBP10.32□□□□□ -0.76
TMEM116-216ENST00000552800 EPHB4P54760 987 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 PDE4CQ08493 712 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 MRPL58Q14197 206 aaKnown RBP10.32□□□□□ -0.76
TMEM116-216ENST00000552800 PKN2Q16513 984 aaKnown RBP10.32□□□□□ -0.76
TMEM116-216ENST00000552800 TIGD5Q53EQ6 642 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 EFHC1Q5JVL4 640 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 DCUN1D2Q6PH85 259 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 LRRC8DQ7L1W4 858 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 COLGALT2Q8IYK4 626 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 FUKQ8N0W3 1084 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 MYCBPAPQ8TBZ2 947 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 IPO4Q8TEX9 1081 aaKnown RBP10.32□□□□□ -0.76
TMEM116-216ENST00000552800 TEKT4Q8WW24 435 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 LINC01599Q8WXQ3 324 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 ARMC5Q96C12 935 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 KRT12Q99456 494 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 ERP44Q9BS26 406 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
TMEM116-216ENST00000552800 OXCT2Q9BYC2 517 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-216ENST00000552800 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 FAM114A2Q9NRY5 505 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 SMARCAL1Q9NZC9 954 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 EHD2Q9NZN4 543 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 HESX1Q9UBX0 185 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 LIMD1Q9UGP4 676 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 NOD1Q9Y239 953 aa10.32□□□□□ -0.76
TMEM116-216ENST00000552800 M0QYV0 167 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 PAPSS1O43252 624 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 NBNO60934 754 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 FBXO21O94952 628 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 TRUB2O95900 331 aaKnown RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 CTSHP09668 335 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 NPR3P17342 541 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 PCSK1P29120 753 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 ECHS1P30084 290 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 COILP38432 576 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 CDKN2BP42772 138 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 KCNC4Q03721 635 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 MAPRE1Q15691 268 aaKnown RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 HADHQ16836 314 aaKnown RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 C2CD6Q53TS8 623 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 TFDP3Q5H9I0 405 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 KIAA0319Q5VV43 1072 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 WSCD1Q658N2 575 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 PM20D1Q6GTS8 502 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 LLGL2Q6P1M3 1020 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 SLC39A5Q6ZMH5 540 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 CYP4V2Q6ZWL3 525 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 STRADAQ7RTN6 431 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 CPNE8Q86YQ8 564 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 IQCKQ8N0W5 287 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 C3orf58Q8NDZ4 430 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 ATL2Q8NHH9 583 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 JOSD2Q8TAC2 188 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 UBA3Q8TBC4 463 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 PGAP3Q96FM1 320 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-216ENST00000552800 MCEEQ96PE7 176 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 SLC9A7Q96T83 725 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 RTP3Q9BQQ7 232 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 APOL6Q9BWW8 343 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 OSBPL8Q9BZF1 889 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 RAB17Q9H0T7 212 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 GOLGA2P5Q9HBQ8 144 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 PTPRDP23468 1912 aa10.31□□□□□ -0.76
TMEM116-216ENST00000552800 HHLA1C9JL84 531 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 E5RJQ4 531 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 SYN3O14994 580 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 MDM4O15151 490 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 TLL1O43897 1013 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 SASH3O75995 380 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 RNF8O76064 485 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 HEXIM1O94992 359 aaKnown RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 TJP3O95049 919 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 ODC1P11926 461 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 CCL5P13501 91 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 GPD1P21695 349 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 IVDP26440 423 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 RFC2P35250 354 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 SCNN1GP51170 649 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 RBM10P98175 930 aaKnown RBP10.3□□□□□ -0.76
TMEM116-216ENST00000552800 LMNB2Q03252 620 aa10.3□□□□□ -0.76
TMEM116-216ENST00000552800 ADCY1Q08828 1119 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms