RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, human

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK4-209	ENST00000551800	UNC13D	Q70J99	1090 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	FILIP1	Q7Z7B0	1213 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	HSCB	Q8IWL3	235 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	FBXO32	Q969P5	355 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	SPACA7	Q96KW9	195 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	MRPL45	Q9BRJ2	306 aa	Known RBP	18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	EDEM2	Q9BV94	578 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	GCNT4	Q9P109	453 aa		18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	CGN	Q9P2M7	1197 aa	Known RBP	18.2	■□□□□ 0.5
CDK4-209	ENST00000551800	POLR2D	O15514	142 aa	Known RBP	18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	TACC1	O75410	805 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	RTN3	O95197	1032 aa	Predicted RBP	18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	APOD	P05090	189 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	TCF3	P15923	654 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	PTPN1	P18031	435 aa	Known RBP	18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	RAP1GAP	P47736	663 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	LIMK1	P53667	647 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	NOP14	P78316	857 aa	Known RBP	18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	PLK5	Q496M5	336 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	ANO7	Q6IWH7	933 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	B3GALNT2	Q8NCR0	500 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	ZNF507	Q8TCN5	953 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	C8orf48	Q96LL4	319 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	BLZF1	Q9H2G9	400 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	SMOC1	Q9H4F8	434 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	SH3BP1	Q9Y3L3	701 aa		18.19	■□□□□ 0.5
CDK4-209	ENST00000551800	P4HA1	P13674	534 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	YWHAQ	P27348	245 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	ATIC	P31939	592 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	AFM	P43652	599 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	USP46	P62068	366 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	KDSR	Q06136	332 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	TAF10	Q12962	218 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	PKP1	Q13835	747 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	E2F4	Q16254	413 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	ST3GAL2	Q16842	350 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	ZNF667	Q5HYK9	610 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	STPG1	Q5TH74	334 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	BTBD8	Q5XKL5	378 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	SCARA3	Q6AZY7	606 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	NUDT18	Q6ZVK8	323 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	CYP2U1	Q7Z449	544 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	PGBD3	Q8N328	593 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	GOLGA5	Q8TBA6	731 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	ZC3H10	Q96K80	434 aa	Known RBP	18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	TNIP3	Q96KP6	325 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	LINC00597	Q9H2U6	94 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	POLM	Q9NP87	494 aa	Predicted RBP	18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	SLC39A2	Q9NP94	309 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	EXOC1	Q9NV70	894 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	CFAP97	Q9P2B7	532 aa		18.18	■□□□□ 0.5
CDK4-209	ENST00000551800	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	SCAMP3	O14828	347 aa	Known RBP	18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	CYP17A1	P05093	508 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	PREPL	Q4J6C6	727 aa	Predicted RBP	18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	NUP93	Q8N1F7	819 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	PNKP	Q96T60	521 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	C7orf25	Q9BPX7	421 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	TTLL2	Q9BWV7	592 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	ZNF518B	Q9C0D4	1074 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	DUSP15	Q9H1R2	295 aa	Predicted RBP	18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	DPEP3	Q9H4B8	488 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	TBC1D14	Q9P2M4	693 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	EBF1	Q9UH73	591 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	ANGPTL2	Q9UKU9	493 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	MMP17	Q9ULZ9	603 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	INVS	Q9Y283	1065 aa		18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	CNOT1	A5YKK6	2376 aa	Known RBP	18.17	■□□□□ 0.5
CDK4-209	ENST00000551800	ZNF840P	A6NDX5	716 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	DCLK1	O15075	740 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	MAP3K13	O43283	966 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	CAVIN2	O95810	425 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	CST3	P01034	146 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	ZSCAN22	P10073	491 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	ADH5	P11766	374 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	PDIA4	P13667	645 aa	Known RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	TIE1	P35590	1138 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	DHPS	P49366	369 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	AP3M2	P53677	418 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	MYL6	P60660	151 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	SLC7A9	P82251	487 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	DAB2IP	Q5VWQ8	1189 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	CCDC33	Q8N5R6	958 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	SPRYD3	Q8NCJ5	442 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	SMARCD1	Q96GM5	515 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	DNAI2	Q9GZS0	605 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	DMAP1	Q9NPF5	467 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	ARHGEF4	Q9NR80	690 aa		18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	TPR	P12270	2363 aa	Known RBP	18.16	■□□□□ 0.5
CDK4-209	ENST00000551800	MAP1B	P46821	2468 aa	Known RBP	18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	CLDN5	O00501	218 aa		18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	TGFB1I1	O43294	461 aa		18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	FAM163B	P0C2L3	166 aa		18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	IRF1	P10914	325 aa		18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	OPRD1	P41143	372 aa		18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	MRPS21	P82921	87 aa	Known RBP	18.15	■□□□□ 0.5
CDK4-209	ENST00000551800	GOLGA8F	Q08AF8	430 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms