RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 FAM200BP0CF97 657 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 ARSAP15289 507 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 TRIM21P19474 475 aaKnown RBP17.71■□□□□ 0.43
BRF1-219ENST00000551787 PGFP49763 221 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 SLC5A3P53794 718 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 RAD23BP54727 409 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 FZD5Q13467 585 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 ANGPT1Q15389 498 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 SH3RF2Q8TEC5 729 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 FBXO32Q969P5 355 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 MED15Q96RN5 788 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 FAM83CQ9BQN1 747 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 SMPD4Q9NXE4 827 aa17.71■□□□□ 0.43
BRF1-219ENST00000551787 MRPS17Q9Y2R5 130 aaKnown RBP17.71■□□□□ 0.43
BRF1-219ENST00000551787 SCAMP3O14828 347 aaKnown RBP17.7■□□□□ 0.42
BRF1-219ENST00000551787 ZXDBP98169 803 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 PLCB2Q00722 1185 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 CUL2Q13617 745 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 ZNF268Q14587 947 aaPredicted RBP17.7■□□□□ 0.42
BRF1-219ENST00000551787 PPP1R26Q5T8A7 1209 aaPredicted RBP17.7■□□□□ 0.42
BRF1-219ENST00000551787 FOXR2Q6PJQ5 311 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 TXNDC11Q6PKC3 985 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 CLEC20AQ6ZU45 233 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 GPRIN1Q7Z2K8 1008 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 SLC4A11Q8NBS3 891 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 TMEM176AQ96HP8 235 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 LMAN1LQ9HAT1 526 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 HPS4Q9NQG7 708 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 SPATA6Q9NWH7 488 aaPredicted RBP17.7■□□□□ 0.42
BRF1-219ENST00000551787 GMIPQ9P107 970 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 RWDD2AQ9UIY3 292 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 WNT6Q9Y6F9 365 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 PTPRDP23468 1912 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 VPS13AQ96RL7 3174 aa17.7■□□□□ 0.42
BRF1-219ENST00000551787 SPECC1L-ADORA2AF8WAN1 911 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 PPP3CCP48454 512 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 MTF1Q14872 753 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 ZNF77Q15935 545 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 ITPRIPL2Q3MIP1 535 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 C1orf210Q8IVY1 113 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 TRIM59Q8IWR1 403 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 ZNF687Q8N1G0 1237 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 IPO9Q96P70 1041 aaKnown RBP17.69■□□□□ 0.42
BRF1-219ENST00000551787 OSBPL6Q9BZF3 934 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 NUP62CLQ9H1M0 184 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 LINC00597Q9H2U6 94 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 C8orf33Q9H7E9 229 aaPredicted RBP17.69■□□□□ 0.42
BRF1-219ENST00000551787 CSNK1G1Q9HCP0 422 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 DUS2Q9NX74 493 aaKnown RBP17.69■□□□□ 0.42
BRF1-219ENST00000551787 IL37Q9NZH6 218 aa17.69■□□□□ 0.42
BRF1-219ENST00000551787 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 HHLA1C9JL84 531 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 NCAM2O15394 837 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 GNA14O95837 355 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 ACO1P21399 889 aaKnown RBP17.68■□□□□ 0.42
BRF1-219ENST00000551787 CTHP32929 405 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 RUNX3Q13761 415 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 PON2Q15165 354 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 RRAGAQ7L523 313 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 ALYREFQ86V81 257 aaKnown RBP17.68■□□□□ 0.42
BRF1-219ENST00000551787 TTC39CQ8N584 583 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 MLKLQ8NB16 471 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 KAT5Q92993 513 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 CLDN23Q96B33 292 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 FAXDC2Q96IV6 333 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 DUSP16Q9BY84 665 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 DNAI2Q9GZS0 605 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 CCSER2Q9H7U1 834 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 RBM12Q9NTZ6 932 aaKnown RBP17.68■□□□□ 0.42
BRF1-219ENST00000551787 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.68■□□□□ 0.42
BRF1-219ENST00000551787 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
BRF1-219ENST00000551787 DENND4CQ5VZ89 1909 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 LEFTY2O00292 366 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 COCHO43405 550 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 FGFR1OPO95684 399 aaKnown RBP17.67■□□□□ 0.42
BRF1-219ENST00000551787 OAS1P00973 400 aaKnown RBP17.67■□□□□ 0.42
BRF1-219ENST00000551787 AFPP02771 609 aaKnown RBP17.67■□□□□ 0.42
BRF1-219ENST00000551787 CCDC192P0DO97 292 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 MBL2P11226 248 aaPredicted RBP17.67■□□□□ 0.42
BRF1-219ENST00000551787 PDE6CP51160 858 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 SLC7A9P82251 487 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 CETN1Q12798 172 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 MTAPQ13126 283 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 DPCR1Q3MIW9 517 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 HECTD3Q5T447 861 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 RALGPS2Q86X27 583 aaPredicted RBP17.67■□□□□ 0.42
BRF1-219ENST00000551787 PPM1KQ8N3J5 372 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 EHBP1Q8NDI1 1231 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 LMO3Q8TAP4 145 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 NT5C1BQ96P26 610 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 GBP4Q96PP9 640 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 IRF2BPLQ9H1B7 796 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 CPQQ9Y646 472 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
BRF1-219ENST00000551787 NUP210Q8TEM1 1887 aaPredicted RBP17.67■□□□□ 0.42
BRF1-219ENST00000551787 ZNF638Q14966 1978 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms